Alternatives and similar repositories for TMD:

Users that are interested in TMD are comparing it to the libraries listed below

• cuntzlab / treestoolbox
  TREES toolbox
  ☆27Updated 6 months ago
• MetaCell / nwb-explorer
  NWB Explorer is a web application to visualise and analyse the content of NWB:N 2 files
  ☆24Updated 3 weeks ago
• berenslab / MorphoPy
  ☆37Updated 7 months ago
• seung-lab / igneous
  Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.
  ☆47Updated this week
• BlueBrain / MorphIO
  A python and C++ library for reading and writing neuronal morphologies
  ☆27Updated 3 weeks ago
• StructuralNeurobiologyLab / SyConn
  Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.
  ☆41Updated 8 months ago
• NeurodataWithoutBorders / nwbwidgets
  Explore the hierarchical structure of NWB 2.0 files and visualize data with Jupyter widgets.
  ☆48Updated 2 weeks ago
• int-brain-lab / ibllib
  IBL core shared libraries
  ☆62Updated this week
• orena1 / neuron_reduce
  ☆25Updated 4 years ago
• roybens / NeuroGPU
  ☆17Updated 2 years ago
• BlueBrain / Long-range-micro-connectome
  BlueBrain's recipe writer to parameterize structure and logic of a mouse whole-neocortex connectome
  ☆10Updated 2 years ago
• BlueBrain / NeuroM
  Neuronal Morphology Analysis Tool
  ☆104Updated 3 weeks ago
• JaneliaSciComp / SharkViewer
  SharkViewer is a web-based viewer for SWC neuron files. It is written entirely in JavaScript using Three.js.
  ☆24Updated 2 years ago
• flatironinstitute / neurosift
  Browser-based NWB visualization and DANDI exploration
  ☆53Updated this week
• CAVEconnectome / CAVEclient
  This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.
  ☆26Updated this week
• AllenInstitute / sonata
  Collaboration between BBP and AIBS
  ☆56Updated 8 months ago
• catalystneuro / nwb-conversion-tools
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
  ☆25Updated 2 years ago
• anne-urai / largescale_recordings
  Urai AE, Doiron B, Leifer AM & Churchland AK (2022) Large-scale neural recordings call for new insights to link brain and behavior. Natur…
  ☆18Updated 3 years ago
• BlueBrain / atlas-alignment
  Blue Brain multi-modal registration and alignment toolbox
  ☆11Updated last year
• NeurodataWithoutBorders / nwb-schema
  Data format specification schema for the NWB neurophysiology data format
  ☆55Updated this week
• JustasB / hoc2swc
  Converter for NEURON simulator HOC files to SWC
  ☆12Updated 4 years ago
• int-brain-lab / iblrig
  Main repository for IBL rig code
  ☆21Updated this week
• INM-6 / viziphant
  Visualization of electrophysiological data from Elephant
  ☆22Updated 5 months ago
• BigNeuron / Code_and_Analysis_Tools
  ☆12Updated 2 years ago
• cunningham-lab / neurocaas
  IaC codebase for the NeuroCAAS Platform
  ☆37Updated last year
• int-brain-lab / mtscomp
  Multichannel time series lossless compression in pure Python based on NumPy and zlib
  ☆39Updated this week
• int-brain-lab / ONE
  Open Neurophysiology Environment
  ☆18Updated 2 weeks ago
• AllenInstitute / MicronsBinder
  A collection of notebooks to provide examples of using Microns-explorer.org datasets
  ☆34Updated 9 months ago
• MouseLand / pykilosort
  WIP: Python port of Kilosort2
  ☆50Updated last year
• brian-team / brian2modelfitting
  Model fitting toolbox for the Brian 2 simulator
  ☆14Updated last year