BlueBrain / TMDLinks
A python package for the topological analysis of neurons.
☆28Updated 8 months ago
Alternatives and similar repositories for TMD
Users that are interested in TMD are comparing it to the libraries listed below
Sorting:
- ☆12Updated 2 months ago
- Neuronal Morphology Analysis Tool☆108Updated 8 months ago
- This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.☆32Updated 2 weeks ago
- Collaboration between BBP and AIBS☆57Updated last year
- A Python package for feature extraction of neural morphologies☆42Updated last week
- Browser-based NWB visualization and DANDI exploration☆60Updated last week
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 4 years ago
- NWB Explorer is a web application to visualise and analyse the content of NWB:N 2 files☆25Updated 2 months ago
- TREES toolbox☆28Updated 6 months ago
- ☆26Updated 4 years ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆55Updated last week
- IaC codebase for the NeuroCAAS Platform☆38Updated last year
- Automated 3D brain registration with support for multiple species and atlases.☆138Updated 3 weeks ago
- Explore the hierarchical structure of NWB 2.0 files and visualize data with Jupyter widgets.☆50Updated 2 weeks ago
- Repository for collecting materials from nwb hackathons☆24Updated 5 months ago
- IBL core shared libraries☆63Updated last week
- A python and C++ library for reading and writing neuronal morphologies☆28Updated 8 months ago
- Tools for working with single-neuron morphological reconstructions☆22Updated last year
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆42Updated 3 months ago
- Python library for analysis of neuroanatomical data.☆106Updated last week
- A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing digital reconstructions of ne…☆138Updated 3 months ago
- A modular package to control stimulation and track behaviour☆47Updated 11 months ago
- Urai AE, Doiron B, Leifer AM & Churchland AK (2022) Large-scale neural recordings call for new insights to link brain and behavior. Natur…☆18Updated 3 years ago
- Data format specification schema for the NWB neurophysiology data format☆60Updated 3 weeks ago
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Updated last year
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆41Updated 7 months ago
- Interactive Python course for using the Neurodata Without Borders format☆15Updated 6 years ago
- ☆17Updated 2 years ago
- Analyze neuroscience data in the cloud☆18Updated last year
- Finite-Element Assisted Brain Assembly System for stitching & alignment of connectomics data☆18Updated 3 weeks ago