BlueBrain / NeuroMorphoVisLinks
A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing digital reconstructions of neuronal morphology skeletons extracted from microscopy stacks.
☆139Updated 2 weeks ago
Alternatives and similar repositories for NeuroMorphoVis
Users that are interested in NeuroMorphoVis are comparing it to the libraries listed below
Sorting:
- Python library for analysis of neuroanatomical data.☆104Updated 2 weeks ago
- A python and C++ library for reading and writing neuronal morphologies☆28Updated 5 months ago
- Neuronal Morphology Analysis Tool☆106Updated 5 months ago
- BlueBrain's recipe writer to parameterize structure and logic of a mouse whole-neocortex connectome☆10Updated 3 years ago
- Generates neuroscience videos from high-level descriptions using Blender or VVDViewer.☆33Updated 2 months ago
- Exports 3D structure and activity from NEURON simulator to Blender☆30Updated last month
- The NeuroMorph analysis and visualization toolkit☆67Updated 10 months ago
- Automated 3D brain registration with support for multiple species and atlases.☆134Updated this week
- A python package for the topological analysis of neurons.☆28Updated 5 months ago
- Collaboration between BBP and AIBS☆58Updated last year
- www.vaa3d.org☆79Updated 7 years ago
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆41Updated last week
- A Python interface to access neuroanatomical atlases☆156Updated last week
- A modular package to control stimulation and track behaviour☆46Updated 9 months ago
- Interactive visualization framework for geometrically detailed neuron simulations☆30Updated 3 years ago
- MagellanMapper is a graphical interface for 3D bioimage annotation, atlas registration, and regional quantification☆22Updated last week
- This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.☆30Updated last week
- TREES toolbox☆28Updated 3 months ago
- Brain2Mesh - a one-liner for high-quality brain mesh generation☆39Updated 4 months ago
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- Flow-Registration toolbox for 2P motion compensation☆24Updated last year
- Software package for neuron reconstruction and visualization☆39Updated 2 months ago
- A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing vasculature (or blood vessels…☆47Updated last year
- Rendering anatomical heatmaps with brainrender and matplotlib☆44Updated last month
- FluoRender is an interactive tool for fluorescence microscopy data visualization and analysis☆45Updated this week
- Data format specification schema for the NWB neurophysiology data format☆59Updated 3 weeks ago
- Live Mouse Tracker analysis☆32Updated 2 months ago
- Brain flatmaps generation☆11Updated 2 years ago
- The Blue Brain BioExplorer (BBBE) is a tool for data visualization experts and scientists to extract and analyze scientific data from vis…☆65Updated 8 months ago
- neuroConstruct: biophysically detailed neuronal modelling in 3D☆52Updated 5 months ago