BlueBrain / NeuroMorphoVisLinks
A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing digital reconstructions of neuronal morphology skeletons extracted from microscopy stacks.
☆136Updated 2 months ago
Alternatives and similar repositories for NeuroMorphoVis
Users that are interested in NeuroMorphoVis are comparing it to the libraries listed below
Sorting:
- Python library for analysis of neuroanatomical data.☆107Updated this week
- A python and C++ library for reading and writing neuronal morphologies☆28Updated 10 months ago
- A python package for the topological analysis of neurons.☆28Updated 10 months ago
- The NeuroMorph analysis and visualization toolkit☆67Updated last year
- Generates neuroscience videos from high-level descriptions using Blender or VVDViewer.☆33Updated 2 weeks ago
- Neuronal Morphology Analysis Tool☆108Updated 10 months ago
- Brain2Mesh - a one-liner for high-quality brain mesh generation☆41Updated 2 months ago
- BlueBrain's recipe writer to parameterize structure and logic of a mouse whole-neocortex connectome☆10Updated 3 years ago
- Automated 3D brain registration with support for multiple species and atlases.☆143Updated last week
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆43Updated 5 months ago
- TREES toolbox☆28Updated 8 months ago
- Live Mouse Tracker analysis☆34Updated last month
- MagellanMapper is a graphical interface for 3D bioimage annotation, atlas registration, and regional quantification☆22Updated last week
- A Python interface to access neuroanatomical atlases☆170Updated this week
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆63Updated this week
- www.vaa3d.org☆80Updated 7 years ago
- ☆39Updated 4 months ago
- Exports 3D structure and activity from NEURON simulator to Blender☆30Updated 3 weeks ago
- Interactive visualization framework for geometrically detailed neuron simulations☆31Updated 3 years ago
- Collaboration between BBP and AIBS☆59Updated last month
- NWB Explorer is a web application to visualise and analyse the content of NWB:N 2 files☆27Updated 4 months ago
- A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing vasculature (or blood vessels…☆50Updated 2 years ago
- A modular package to control stimulation and track behaviour☆46Updated last year
- www.vaa3d.org☆114Updated last year
- Software interfaces for interacting with brain atlases - Python client☆56Updated last week
- This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.☆35Updated last month
- The framework for quantification of neuronal anatomy☆55Updated last week
- Rendering anatomical heatmaps with brainrender and matplotlib☆46Updated 2 weeks ago
- Brain flatmaps generation☆11Updated 3 years ago
- A Python package for feature extraction of neural morphologies☆46Updated 3 months ago