☆19Oct 28, 2026Updated last week
Alternatives and similar repositories for RTCGAToolbox
Users that are interested in RTCGAToolbox are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Static SCIP code-intelligence indexer for R packages (tree-sitter, optional R runtime for deeper symbol resolution)☆15Updated this week
- A light weight shiny based web app to access TCGA data☆15Apr 29, 2015Updated 11 years ago
- Reproducible GSEA Benchmarking☆14May 14, 2026Updated 5 months ago
- An extension class of SummarizedExperiment to allow hierarchical structure on the row or column dimension☆14Jul 22, 2025Updated last year
- An R package for annotation of circular RNAs☆11Mar 30, 2020Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Romulus: Robust multi-state identification of transcription factor binding sites from DNase-seq data☆10Mar 6, 2019Updated 7 years ago
- download files in R using wget -c☆16Aug 20, 2025Updated last year
- ☆20Feb 24, 2017Updated 9 years ago
- ARCHIVED☆11May 10, 2022Updated 4 years ago
- Deconvolve individual immune cell types from cancer data☆10Apr 29, 2017Updated 9 years ago
- R package for the identification of functionally important subnetworks☆14May 6, 2024Updated 2 years ago
- Visualising single-cell trajectories, including comparisons between two models 📈☆32Dec 9, 2021Updated 4 years ago
- phylogenetic networks using ggplot2 and ggtree☆13Dec 24, 2024Updated last year
- A pipeline to generate a Deep Nerual Network cell type deconvolution model for bulk RNASeq samples from single cell experiment data☆12Nov 17, 2020Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Bioconductor package for management of multi-assay data☆76Oct 26, 2026Updated last week
- 16S rRNA Sequencing Data from the Human Microbiome Project☆11May 14, 2026Updated 5 months ago
- Cell signatures, with confidence.☆10Jun 1, 2020Updated 6 years ago
- Sequential lm for methylation data☆10Jan 11, 2019Updated 7 years ago
- Normalization for single cell RNA-seq data☆11Aug 25, 2022Updated 4 years ago
- Traditional Chinese Medicine Data Analysis and Visualization☆21Oct 15, 2026Updated 3 weeks ago
- For DEMO purposes - Containerised Rstudio instance running behind an Nginx proxy, using Docker Compose☆12Dec 25, 2018Updated 7 years ago
- Single Cell Genomics for Enhancing Cell Composition Inference from Bulk Genomics Data☆21Jul 13, 2021Updated 5 years ago
- notes and materials from dbug meetings☆10Sep 26, 2018Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Supplementary code for the analyses presented in the manuscript: Microglia coordinate intracellular interactions during spinal cord repai…☆12Jul 2, 2024Updated 2 years ago
- Template for building a bioconductor workshop package using github actions☆23Aug 5, 2026Updated 3 months ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Oct 26, 2018Updated 8 years ago
- DEPRECATED! Please use linkml-project-cookiecutter instead.☆10May 12, 2023Updated 3 years ago
- Variant quality checking scripts.☆12Feb 4, 2016Updated 10 years ago
- Fast and easy echarts with data.table backend for wrangling and a simple API☆26Oct 21, 2026Updated 2 weeks ago
- Command line tools for IntSpan related bioinformatics operations☆12Apr 9, 2025Updated last year
- ☆13Jun 24, 2016Updated 10 years ago
- ☆15Mar 4, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- MeSH Enrichment and Semantic analyses☆13Sep 28, 2026Updated last month
- ☆12Oct 12, 2026Updated 3 weeks ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆46Oct 28, 2026Updated last week
- Automate package and project setup for Bioconductor packages☆56Mar 31, 2026Updated 7 months ago
- Runs and compares different methylation based cell type deconvolution algorithms☆12Jul 30, 2025Updated last year
- Contribute Packages to Bioconductor☆149May 29, 2026Updated 5 months ago
- authenticator meant to be used with Scatter and Universal Authenticator Library☆14Jul 18, 2023Updated 3 years ago