Arseha / peakonly

Related projects ⓘ

Alternatives and complementary repositories for peakonly

• bihealth / NeatMS
  NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.
  ☆28Updated 3 years ago
• mobiusklein / ms_peak_picker
  A small library to provide peak picking for software processing mass spectrometry data
  ☆20Updated 2 months ago
• iomega / spec2vec
  Word2Vec based similarity measure of mass spectrometry data.
  ☆62Updated 3 months ago
• sirius-ms / sirius
  SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository…
  ☆88Updated 3 weeks ago
• sorenwacker / ms-peakonly
  Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.
  ☆14Updated 6 months ago
• matchms / ms2deepscore
  Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity
  ☆56Updated this week
• XiminHu / mass-suite
  ☆22Updated 9 months ago
• griquelme / tidyms
  TidyMS: Tools for working with MS data in untargeted metabolomics
  ☆53Updated 4 months ago
• matchms / matchms
  Python library for processing (tandem) mass spectrometry data and for computing spectral similarities.
  ☆188Updated this week
• pyQms / pyqms
  pyQms, generalized, fast and accurate mass spectrometry data quantification
  ☆28Updated 4 months ago
• YuanyueLi / SpectralEntropy
  The similarity score for spectral comparison
  ☆71Updated 4 months ago
• frallain / pymsfilereader
  Thermo MSFileReader Python bindings
  ☆68Updated 3 years ago
• pFindStudio / pDeep
  pDeep: Predicting MS/MS Spectra of Peptides with Deep Learning
  ☆35Updated 5 years ago
• HuanLab / BUDDY
  Bottom-up MS/MS interrogation & Experiment-specific global annotation
  ☆29Updated 2 months ago
• hcji / DeepMASS
  A known-to-unknown metabolite identification workflow
  ☆19Updated 4 years ago
• YuanyueLi / MSEntropy
  Spectral entropy for mass spectrometry data.
  ☆25Updated 2 weeks ago
• lkytal / PredFull
  This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network
  ☆28Updated last year
• pnnl / deimos
  ☆32Updated 5 months ago
• mwang87 / MassQueryLanguage
  The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …
  ☆38Updated 4 months ago
• mobiusklein / brainpy
  A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations
  ☆19Updated 5 months ago
• michaelwitting / RepoRT
  This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …
  ☆38Updated this week
• bittremieux / falcon
  Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.
  ☆26Updated this week
• PNNL-Comp-Mass-Spec / Thermo-Raw-File-Reader
  .NET DLL wrapper for reading Thermo .Raw files. Uses ThermoFisher.CommonCore NuGet packages provided by Thermo Fisher Scientific
  ☆38Updated 2 months ago
• meowcat / MSNovelist
  ☆59Updated 3 months ago
• BAMeScience / fiora
  Fiora is an in silico fragmentation algorithm for small compounds that produces simulated tandem mass spectra (MS/MS). The framework empl…
  ☆24Updated this week
• mwang87 / NP-Classifier
  ☆19Updated last month
• fickludd / dinosaur
  Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.
  ☆42Updated 2 years ago
• EMSL-Computing / CoreMS
  CoreMS is a comprehensive mass spectrometry software framework
  ☆52Updated this week
• MetaSys-LISBP / IsoCor
  IsoCor: Isotope Correction for mass spectrometry labeling experiments
  ☆24Updated last year
• metgem / metgem
  Calculation and visualization of molecular networks based on t-SNE algorithm
  ☆32Updated 2 months ago