Alternatives and similar repositories for ms2deepscore

Users that are interested in ms2deepscore are comparing it to the libraries listed below

• pnnl / darkchem
  ☆32Updated 7 months ago
• mwang87 / NP-Classifier
  ☆25Updated 2 weeks ago
• merlin-ms / awesome-mass-spectral-libraries
  ☆20Updated last year
• michaelwitting / RepoRT
  This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …
  ☆50Updated 3 months ago
• samgoldman97 / mist
  Encoding MS/MS spectra using formula transformers for inferring molecular properties
  ☆62Updated last year
• XiminHu / mass-suite
  ☆26Updated last year
• mobiusklein / brainpy
  A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations
  ☆21Updated last month
• zhanghailiangcsu / MSBERT
  Improve the accuracy of database search by using BERT to embed MS/MS reasonably
  ☆18Updated 9 months ago
• meowcat / MSNovelist
  ☆66Updated 10 months ago
• biosustain / pyOpenMS_UmetaFlow
  Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)
  ☆22Updated 8 months ago
• griquelme / tidyms
  TidyMS: Tools for working with MS data in untargeted metabolomics
  ☆55Updated last year
• iomega / spec2vec
  Word2Vec based similarity measure of mass spectrometry data.
  ☆70Updated 11 months ago
• Philipbear / msbuddy
  a python package for molecular formula analysis in MS-based small molecule studies
  ☆27Updated this week
• HuanLab / BUDDY
  Bottom-up MS/MS interrogation & Experiment-specific global annotation
  ☆28Updated 6 months ago
• pnnl / MSAC
  ☆23Updated 3 months ago
• lkytal / PredFull
  This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network
  ☆30Updated last year
• pnnl / deimos
  ☆34Updated last month
• lucinamay / biosynfoni
  a *biosynformatic* fingerprint to explore natural product distance and diversity
  ☆18Updated 2 weeks ago
• sirius-ms / sirius
  SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository…
  ☆110Updated 2 weeks ago
• JamesJeffryes / pyclassyfire
  A python client for the ClassyFire API
  ☆16Updated 5 years ago
• bittremieux-lab / falcon
  Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.
  ☆29Updated last month
• mohimanilab / molDiscovery
  ☆15Updated 3 years ago
• mobiusklein / ms_peak_picker
  A small library to provide peak picking for software processing mass spectrometry data
  ☆23Updated 7 months ago
• PDBeurope / pdbe-api-training
  Interactive Python notebooks for PDBe API training
  ☆55Updated 3 weeks ago
• protwis / protwis
  Protwis is the backbone of the GPCRdb. The GPCRdb contains reference data, interactive visualisation and experiment design tools for G pr…
  ☆41Updated 2 weeks ago
• BAMeScience / fiora
  Meet FIORA! An in silico fragmentation algorithm designed to predict tandem mass spectra (MS/MS) with high accuracy. Using graph neural n…
  ☆35Updated 3 weeks ago
• Boehringer-Ingelheim / pyPept
  pyPept: a python library to generate atomistic 2D and 3D representations of peptides
  ☆73Updated 10 months ago
• hcji / DeepEI
  Predicting molecular fingerprint from electron−ionization mass spectrum with deep neural networks
  ☆35Updated last year
• JoaoRodrigues / interfacea
  An open-source library for the analysis of protein interactions.
  ☆29Updated 3 years ago
• YuanyueLi / FlashEntropySearch
  Flash entropy search
  ☆14Updated last year