brain-research / deep-molecular-massspecView external linksLinks
Mass Spectrometry for Small Molecules using Deep Learning
☆134Jun 30, 2021Updated 4 years ago
Alternatives and similar repositories for deep-molecular-massspec
Users that are interested in deep-molecular-massspec are comparing it to the libraries listed below
Sorting:
- Predicting molecular fingerprint from electron−ionization mass spectrum with deep neural networks☆36Mar 21, 2024Updated last year
- Tandem Mass Spectrum Prediction with Graph Transformers☆99Aug 26, 2024Updated last year
- Efficiently predicting high resolution mass spectra with graph neural networks☆32Aug 3, 2023Updated 2 years ago
- ☆15Oct 4, 2021Updated 4 years ago
- [Bioinformatics] 3DMolMS: prediction of tandem mass spectra from 3D molecular conformations☆23Oct 13, 2025Updated 4 months ago
- Publicly-accessible repo for ACS paper "Rapid Approximate Subset-Based Spectra Prediction for Electron Ionization−Mass Spectrometry" (RAS…☆25Jan 25, 2023Updated 3 years ago
- ☆11Nov 30, 2024Updated last year
- Molecular fingerprint prediction from MS/MS (FingerID).☆19Feb 28, 2018Updated 7 years ago
- Python library for processing (tandem) mass spectrometry data and for computing spectral similarities.☆248Updated this week
- A modular JavaScript viewer for mass spectrometry data☆12May 20, 2022Updated 3 years ago
- A known-to-unknown metabolite identification workflow☆21Sep 15, 2020Updated 5 years ago
- DeepMass is a suite of tools to enable mass spectrometry data analysis using modern machine learning techniques.☆52Nov 18, 2021Updated 4 years ago
- ☆16Jul 20, 2022Updated 3 years ago
- MSDK source code repository☆40Sep 22, 2022Updated 3 years ago
- Ultra-fast and Accurate Spectrum Matching☆34Nov 27, 2023Updated 2 years ago
- Code associated with the manuscript: Deep Neural Networks for Classification of LC-MS Spectral Peaks☆14Jan 11, 2021Updated 5 years ago
- ☆121Apr 8, 2023Updated 2 years ago
- Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.☆17May 8, 2024Updated last year
- Predicting tandem mass spectra from molecules☆130Updated this week
- A small library to provide peak picking for software processing mass spectrometry data☆23Dec 3, 2024Updated last year
- mz.unity is an R package for detecting and exploring complex relationships in accurate-mass mass spectrometry data☆14Apr 9, 2016Updated 9 years ago
- ☆15Nov 26, 2021Updated 4 years ago
- Awesome papers and codes list of small molecule mass spectrometry-related machine learning methods☆36Jan 18, 2026Updated 3 weeks ago
- ☆14Dec 27, 2022Updated 3 years ago
- Flash entropy search☆16Sep 24, 2023Updated 2 years ago
- eMetabolomics project: Mass Annotation based on in silico Generated Metabolites☆16Oct 30, 2022Updated 3 years ago
- Package for analyzing MS with Python☆10Jan 11, 2018Updated 8 years ago
- DeepMASS2 is a cross-platform GUI software tool, which enables deep-learning based metabolite annotation via semantic similarity analysis…☆14Jan 22, 2026Updated 3 weeks ago
- MS2Query - machine learning assisted library querying of MS/MS spectra☆54Nov 6, 2025Updated 3 months ago
- This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …☆59Dec 11, 2025Updated 2 months ago
- ☆11Jun 12, 2024Updated last year
- Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity☆71Feb 5, 2026Updated last week
- A declarative API for writing XML documents for HUPO PSI-MS mzML and mzIdentML☆22Jan 19, 2025Updated last year
- A validating SMILES parser, with support for incomplete SMILES☆29Jan 14, 2025Updated last year
- data processing for MS-based metabolomics☆15Nov 10, 2024Updated last year
- CoreMS is a comprehensive mass spectrometry software framework☆64Feb 9, 2026Updated last week
- pymzML - an interface between Python and mzML Mass spectrometry Files☆182Feb 3, 2026Updated last week
- Spectral entropy for mass spectrometry data.☆35Dec 25, 2025Updated last month
- Calculation and visualization of molecular networks based on t-SNE algorithm☆36Jan 29, 2025Updated last year