An R package for the spatial analysis of population genetic data.
☆20Feb 16, 2026Updated 2 weeks ago
Alternatives and similar repositories for gstudio
Users that are interested in gstudio are comparing it to the libraries listed below
Sorting:
- Reconstruct Ancestral State in Phylogenies☆27May 21, 2024Updated last year
- Fast gradient-based optimization of resistance surfaces☆15Jul 9, 2020Updated 5 years ago
- Companion code for Grenié et al. 2022 MEE "Harmonizing taxon names in biodiversity data: a review of tools, databases, and best practice…☆15Jun 28, 2023Updated 2 years ago
- Tools for ecological niche evolution assessment considering uncertainty☆15Mar 10, 2023Updated 2 years ago
- Impute to 1000 genomes efficiently by distributing to SGE, including alignment of target to reference, haplotyping, imputing, converting …☆14May 28, 2014Updated 11 years ago
- Parsers (rule-based) for information extraction of traits from plant treatments☆14Aug 15, 2025Updated 6 months ago
- Mitochondrial Solar Plot☆25Feb 25, 2017Updated 9 years ago
- IMa3☆13May 5, 2025Updated 9 months ago
- 🛠 Useful R functions for various things☆18Jul 4, 2019Updated 6 years ago
- This package (an updated version of 'V.PhyloMaker') can generate a phylogenetic tree for vascular plants based on three different botanic…☆23Nov 17, 2022Updated 3 years ago
- A tool for estimating time-dependent migration rates based on cross-/within-population coalescent rates from MSMC☆16Apr 6, 2025Updated 10 months ago
- Self-Updating Platform for the Estimation of Rates of Speciation, Migration And Relationships of Taxa☆17Jun 24, 2020Updated 5 years ago
- rtrees: an R package to assemble phylogenetic trees from mega-trees☆36Aug 9, 2025Updated 6 months ago
- A Suite of Packages for Analysis of Big Genomic Data☆34Jan 20, 2025Updated last year
- Introductory lesson to generate range maps for butterfly-host plant interactions and predict distributional shifts using publicly availab…☆18Aug 8, 2024Updated last year
- PTP model for species delimitation☆20May 5, 2019Updated 6 years ago
- Herbaria ML☆18Feb 5, 2025Updated last year
- A textbook on population genetics☆18Jan 7, 2026Updated last month
- Repository for "NucleoBench: A Large-Scale Benchmark of Neural Nucleic Acid Design Algorithms"☆26Nov 22, 2025Updated 3 months ago
- A suite of methods and models for studying evolutionary radiations☆25Feb 22, 2023Updated 3 years ago
- 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction☆72Sep 10, 2025Updated 5 months ago
- R package for analysis of hybrids and hybrid zones☆21Dec 30, 2023Updated 2 years ago
- Python version of PHLAWD☆21Oct 28, 2024Updated last year
- Materials for the Workshop "Big Data Ecology"☆18Jul 12, 2021Updated 4 years ago
- A Computation of Functional Spaces and Functional Diversity Indices☆30Dec 19, 2024Updated last year
- A set of tools for modelling ancestry patterns along the genome.☆24Feb 20, 2026Updated last week
- Collection of tutorials to build RNA-KG v2.0 from scratch and for reproducing experiments such as "context-aware" KG pruning, clustering,…☆29Feb 6, 2026Updated 3 weeks ago
- diveRsity: A comprehensive, general purpose population genetics analysis package.☆26Feb 16, 2018Updated 8 years ago
- Powerful Data Cleaner For Biodiversity☆20May 4, 2025Updated 9 months ago
- Experimental EIGENSOFT performance improvements.☆21Nov 1, 2014Updated 11 years ago
- TeraStructure is a new algorithm to fit Bayesian models of genetic variation in human populations on tera-sample-sized data sets (10^12 o…☆49Jan 1, 2020Updated 6 years ago
- Comprehensive, detailed and interactive plots for STRUCTURE and ADMIXTURE population analysis☆24Nov 25, 2024Updated last year
- Package to plot phylogenies with custom shapes☆24Apr 17, 2024Updated last year
- A wrapper program to parallelize and automate runs of "Structure", "fastStructure" and "MavericK".☆25Jul 24, 2025Updated 7 months ago
- Links for Ecology and Evolution☆23Jul 15, 2019Updated 6 years ago
- Implementation of ToL genome assembly workflows☆26Feb 12, 2026Updated 2 weeks ago
- SpadeR provides simple R functions to compute various biodiversity indices and related (dis)similarity measures based on individual-based…☆32Mar 11, 2018Updated 7 years ago
- Assembly Likelihood Estimator☆35Mar 18, 2023Updated 2 years ago
- R package for identifying differentially expressed genes from genome-wide gene expression profiling studies.☆22Jun 21, 2019Updated 6 years ago