An R package for the spatial analysis of population genetic data.
☆20Jun 21, 2026Updated last month
Alternatives and similar repositories for gstudio
Users that are interested in gstudio are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- use paired-end transcriptome reads to scaffold genomes☆12May 30, 2019Updated 7 years ago
- Fast gradient-based optimization of resistance surfaces☆17Jul 9, 2020Updated 6 years ago
- This repository contains the R codes and relevant data for performing the S.PhyloMaker function.☆15Sep 22, 2020Updated 5 years ago
- Extract information from natural history annotations☆10Jul 14, 2026Updated last week
- A python framework for inferring demography from tracts of identity by state as reported in PLoS Genetics by Harris and Nielsen (2013)☆15Aug 1, 2013Updated 12 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A catalog of R graphics and the R code used to produce them☆18Aug 8, 2022Updated 3 years ago
- R package for cleaning taxonomic data.☆13Feb 13, 2025Updated last year
- Analysis of Ebola virus genomes☆17May 18, 2015Updated 11 years ago
- Companion code for Grenié et al. 2022 MEE "Harmonizing taxon names in biodiversity data: a review of tools, databases, and best practice…☆15Mar 17, 2026Updated 4 months ago
- Tools for ecological niche evolution assessment considering uncertainty☆15Mar 10, 2023Updated 3 years ago
- 🛠 Useful R functions for various things☆18Jul 4, 2019Updated 7 years ago
- population genetic simulations with R and Shiny☆28Nov 3, 2024Updated last year
- 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction☆72Sep 10, 2025Updated 10 months ago
- Visualization methods for omics dataset quality control☆10Jun 24, 2026Updated 3 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Repetitive motif detection by Assembly of Repetitive K-mers. RepARK is free for academic and non-profit use. By downloading you agree wit…☆16Sep 16, 2024Updated last year
- Generate mutated sequence files from a reference genome.☆11Jun 12, 2026Updated last month
- Package with functions to handle network data and run Infomap, inspired by ecological networks☆28Apr 24, 2026Updated 2 months ago
- Mitochondrial Solar Plot☆25Feb 25, 2017Updated 9 years ago
- ATLANTIC SERIES: biodiversity hotspot data papers☆19Jun 12, 2023Updated 3 years ago
- SV detection from paired end reads mapping☆38Jul 19, 2010Updated 16 years ago
- A pipeline for extracting SSU rRNA gene from wgs data and applying them for further diversity analysis☆10Jan 30, 2016Updated 10 years ago
- Optimize resistance surfaces using Genetic Algorithms☆44Apr 11, 2026Updated 3 months ago
- Impute to 1000 genomes efficiently by distributing to SGE, including alignment of target to reference, haplotyping, imputing, converting …☆14May 28, 2014Updated 12 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Parsers (rule-based) for information extraction of traits from plant treatments☆14Aug 15, 2025Updated 11 months ago
- I can haz all the phylogenies☆20Dec 5, 2022Updated 3 years ago
- R package for analysis of hybrids and hybrid zones☆21Dec 30, 2023Updated 2 years ago
- Self-Updating Platform for the Estimation of Rates of Speciation, Migration And Relationships of Taxa☆17Jun 24, 2020Updated 6 years ago
- UBC MDS blog and academic site☆17Jul 9, 2026Updated last week
- This package (an updated version of 'V.PhyloMaker') can generate a phylogenetic tree for vascular plants based on three different botanic…☆25Nov 17, 2022Updated 3 years ago
- A textbook on population genetics☆18Updated this week
- A powerful Perl module for simulating the genome digestions by restriction enzymes☆14Sep 10, 2024Updated last year
- A wrapper program to parallelize and automate runs of "Structure", "fastStructure" and "MavericK".☆26Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Longread PacBio sequencing processing for WGS and PureTarget☆16Jun 25, 2026Updated 3 weeks ago
- Introductory lesson to generate range maps for butterfly-host plant interactions and predict distributional shifts using publicly availab…☆18Aug 8, 2024Updated last year
- A Suite of Packages for Analysis of Big Genomic Data☆34Jan 20, 2025Updated last year
- A procedure to find Fst outliers based on an inferred distribution of neutral Fst☆20Jun 9, 2026Updated last month
- Reconstruct Ancestral State in Phylogenies☆30May 21, 2024Updated 2 years ago
- TESS3 is a fast and efficient program for estimating spatial population structure based on geographically constrained non-negative matrix…☆24Jun 21, 2023Updated 3 years ago
- Materials for the Workshop "Big Data Ecology"☆18Jul 12, 2021Updated 5 years ago