Alternatives and similar repositories for GeoBind:

Users that are interested in GeoBind are comparing it to the libraries listed below

• leeyang / DRfold
  ☆38Updated last year
• tiantz17 / PocketAnchor
  Learning Structure-based Pocket Representations for Protein-Ligand Interaction Prediction
  ☆32Updated last year
• HBioquant / DiffBindFR
  Diffusion model based protein-ligand flexible docking method
  ☆102Updated 5 months ago
• jertubiana / ScanNet
  ☆123Updated last year
• LBM-EPFL / PeSTo
  Geometric deep learning method to predict protein binding interfaces from a protein structure.
  ☆124Updated last year
• wengong-jin / abdockgen
  ☆105Updated 2 years ago
• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆60Updated 8 months ago
• ai4protein / Pro-FSFP
  Pro-FSFP: Few-Shot Protein Fitness Prediction
  ☆77Updated 2 months ago
• KailiWang1 / DeepDTAF
  a deep learning architecture for protein-ligand binding affinity prediction
  ☆73Updated last year
• WillHua127 / EnzymeFlow
  Official repository of EnzymeFlow
  ☆82Updated 3 months ago
• LPDI-EPFL / masif-neosurf
  MaSIF-neosurf: surface-based protein design for ternary complexes.
  ☆108Updated last week
• WillHua127 / GENzyme
  Official repository of GENzyme
  ☆45Updated 4 months ago
• CAODH / EquiScore
  ☆69Updated last year
• bcov77 / silent_tools
  A bunch of shell utilities for dealing the silent files
  ☆58Updated last week
• zhanghaicang / carbonmatrix_public
  ☆111Updated 2 weeks ago
• levinthal / Pallatom
  ☆91Updated 5 months ago
• Kuhlman-Lab / evopro
  ☆74Updated 3 weeks ago
• stebliankin / piston
  Evaluating Protein Binding Interfaces with Transformer Networks
  ☆44Updated last year
• kiharalab / GNN_DOVE
  Code for "Protein Docking Model Evaluation by Graph Neural Networks"
  ☆59Updated last year
• THGLab / LP-PDBBind
  ☆38Updated last year
• ai4protein / Pro-Prime
  ☆52Updated 2 months ago
• bytedance / Protenix-Dock
  An accurate and trainable end-to-end protein-ligand docking framework
  ☆76Updated last week
• LPDI-EPFL / masif_seed
  Masif seed paper repository
  ☆148Updated last year
• TencentAI4S / IgGM
  [ICLR2025] Official Implementation of IgGM: A Generative Model for Functional Antibody and Nanobody Design
  ☆59Updated 3 weeks ago
• Valdes-Tresanco-MS / AutoDockTools_py3
  Python3 translation of AutoDockTools
  ☆114Updated 10 months ago
• guaguabujianle / EHIGN_PLA
  ☆15Updated 10 months ago
• DeepGraphLearning / ESM-GearNet
  ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)
  ☆88Updated last year
• schrojunzhang / KarmaDock
  ☆108Updated 7 months ago
• GMdSilva / gms_natcomms_1705932980_data
  Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2
  ☆39Updated 10 months ago
• Mickdub / gvp
  ☆78Updated last year