kyegomez / PairformerLinks
Implementation of the Pairformer model used in AlphaFold 3
☆13Updated this week
Alternatives and similar repositories for Pairformer
Users that are interested in Pairformer are comparing it to the libraries listed below
Sorting:
- ☆12Updated 7 months ago
- Implementation of Nvidia's NeuralPlexer, for end-to-end differentiable design of functional small-molecules and ligand-binding proteins, …☆51Updated last year
- Automancer is a software application that enables researchers to design, automate, and manage their experiments.☆22Updated last year
- A Modular Architecture for Deep Learning Systems☆41Updated last month
- Generative Pretrained Autoregressive Transformer Graph Neural Network applied to the Analysis and Discovery of Materials☆16Updated last year
- A text-to-protein backbone diffusion model.☆8Updated last year
- Python implementation of 3D Zernike moments with NumPy☆10Updated 9 months ago
- Benchmark for LLM-based Agents in Computational Biology☆46Updated last month
- Your favourite classical machine learning algos on the GPU/TPU☆20Updated 6 months ago
- ☆113Updated last month
- ProtMamba: a homology-aware but alignment-free protein state space model☆77Updated last month
- Minimal AlphaFold☆53Updated 10 months ago
- ☆15Updated 2 months ago
- ☆44Updated 3 weeks ago
- Framework enabling modular interchange of language agents, environments, and optimizers☆97Updated this week
- ☆26Updated last year
- Pretraining Code for METAGENE-1☆67Updated 6 months ago
- ☆32Updated 2 months ago
- A tool for predicting the effects of missense mutations on protein stability changes upon missense mutation using protein sequence only. …☆22Updated 2 years ago
- ML-guided enzyme engineering☆64Updated last month
- This repo contains the results data for Round 1 of Adaptyv Bio’s EGFR Protein Design Competition.☆34Updated 7 months ago
- Code supporting the Protein Design Archive (PDA) database publication☆16Updated this week
- ☆15Updated 2 years ago
- Official implementation for the paper "EBMDOCK: NEURAL PROBABILISTIC PROTEIN-PROTEIN DOCKING VIA A DIFFERENTIABLE ENERGY-BASED MODEL" (IC…☆13Updated last year
- LLM Agent that leverages cheminformatics tools to provide informed responses.☆41Updated last week
- Source code of MOLLEO☆45Updated last week
- reasoning model trained using GRPO towards rosetta REF2015 for protein stability☆85Updated this week
- RITA is a family of autoregressive protein models, developed by LightOn in collaboration with the OATML group at Oxford and the Debora Ma…☆97Updated 2 years ago
- Large language models as universal biomedical simulators☆19Updated last year
- Evaluation dataset for AI systems intended to benchmark capabilities foundational to scientific research in biology☆66Updated last month