A Python module to calculate alignment between two sequences using EMBOSS' needle, stretcher, and water
☆17Feb 27, 2025Updated last year
Alternatives and similar repositories for pairwise-sequence-alignment
Users that are interested in pairwise-sequence-alignment are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- MIRROR OF: The European Molecular Biology Open Software Suite (from git://anonscm.debian.org/debian-med/emboss.git)☆34Feb 18, 2022Updated 4 years ago
- Nested sampling packagin for BEAST☆12Aug 12, 2026Updated 2 months ago
- ☆10Jun 5, 2021Updated 5 years ago
- A C library doing fully homomorphic encryption under the license of LGPL.☆10Jun 12, 2023Updated 3 years ago
- ALeS: Adaptive-length spaced-seed design☆10Jun 15, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Explore protein language model embeddings in your browser — surface relationships sequence similarity misses, overlay annotations, and tr…☆17Oct 29, 2026Updated last week
- Semi-supervised Junction Tree Variational Autoencoder for jointly trained property prediction and molecule structure generation. (AAAI 23…☆12Jan 14, 2023Updated 3 years ago
- ☆12Sep 17, 2024Updated 2 years ago
- Accurate prediction of drug–target interactions in drug discovery.☆12Dec 9, 2025Updated 10 months ago
- Google Sheets formulas that look more like code☆15Aug 3, 2017Updated 9 years ago
- A tool to test web scraping rules.☆14Oct 15, 2026Updated 3 weeks ago
- OBS plugin providing a filter for automatically refreshing a browser source in a configurable interval.☆16Oct 11, 2026Updated 3 weeks ago
- RISmed is an R package for downloading and analyzing data from the NCBI databases☆38Feb 5, 2024Updated 2 years ago
- A Python3 script for removal of outlier sequences from a multiple sequence alignment (FASTA format).☆10Jul 6, 2026Updated 4 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆22Sep 30, 2026Updated last month
- BUSCOMP: BUSCO Compiler and Comparison tool☆22Sep 19, 2024Updated 2 years ago
- Evaluating Nanopore-based bacterial variant calling☆23Oct 7, 2026Updated last month
- Identify phenotype-specific k-mers and predict phenotype using sequenced bacterial strains☆21Jan 5, 2026Updated 10 months ago
- Simple GUI-controlled HTML-based stream overlay for fighting games☆11Jun 25, 2023Updated 3 years ago
- This is the official implementation of the paper "A Deep Learning Approach for Rational Ligand Generation with Property Control via React…☆21Sep 28, 2024Updated 2 years ago
- Generates timelapse videos using data exported from the Kanjigrid Anki addon.☆13Jun 5, 2025Updated last year
- finds rsid with genomic position for feasible input format.☆30Aug 11, 2026Updated 2 months ago
- updated version of nwalign with Python 3.X compatibility☆10May 17, 2022Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Python3 command-line and GUI tools for common codon usage statistics given a FASTA of Coding sequences☆13Dec 9, 2025Updated 10 months ago
- Latex Template for AutoML-Conf☆19Feb 19, 2026Updated 8 months ago
- Code for the paper "Refining Language Model with Compositional Explanation" (NeurIPS 2021)☆11Oct 25, 2021Updated 5 years ago
- Code for our EMNLP 2022 paper: Generative Entity Typing with Curriculum Learning.☆13Aug 19, 2023Updated 3 years ago
- Count kmers with a more efficient (faster) hash table☆23Jun 8, 2024Updated 2 years ago
- A Python package for obtaining, parsing and exploring biological taxonomies (GTDB, NCBI, Silva, Greengenes, OTT)☆53May 5, 2026Updated 6 months ago
- Pretrain Graph Transformers on molecular descriptors via masked autoencoding.☆27Sep 28, 2026Updated last month
- ☆22Sep 19, 2025Updated last year
- Class notes for MATH223 at McGill University☆19Apr 24, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- The code for Template-GPT-2 Generation Model for Logic2Text Dataset☆18Jun 1, 2020Updated 6 years ago
- CRISPR knock-in design at scale☆13Oct 15, 2026Updated 3 weeks ago
- Scripts to calculate fingerprints and simiilarity matrices for natural product databases.☆25Apr 3, 2024Updated 2 years ago
- Genome wide orthology inference and dNdS estimation☆101Oct 19, 2026Updated 2 weeks ago
- Public repository for VariantValidator project☆84Oct 5, 2026Updated last month
- OBS plugin providing an image source that loads images asynchronously (causing a lot less lag on load).☆22Oct 11, 2026Updated 3 weeks ago
- Online material and code base for the article Coordinates and Intervals in Graph Based Reference Genomes☆11May 2, 2017Updated 9 years ago