Full-length protein structure determination from cryo-EM maps using deep learning
☆15May 28, 2023Updated 3 years ago
Alternatives and similar repositories for DeepMM
Users that are interested in DeepMM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A python module to compute contact map of proteins☆11Apr 3, 2026Updated 6 months ago
- ☆31Dec 9, 2023Updated 2 years ago
- ☆13Apr 18, 2022Updated 4 years ago
- CryoCRAB: A Curated-Filterable Dataset for Building Cryo-EM Foundation Model☆18Jan 21, 2025Updated last year
- Conversion of PDBx/mmCIF files to best effort/minimal PDB files☆25Nov 1, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Emap2sec+: Detecting Protein and DNA/RNA Structures in Cryo-EM Maps of Intermediate Resolution Using Deep Learning☆19Nov 21, 2025Updated 11 months ago
- Project Molten is the precurssor to Project Deliquesces. The goal is to be able to predict the melting point of a given molecule. The mod…☆11May 11, 2019Updated 7 years ago
- ☆12Feb 18, 2025Updated last year
- ☆12Jan 13, 2025Updated last year
- ☆17Nov 11, 2022Updated 3 years ago
- Transformer for protein function prediction☆34Oct 24, 2024Updated 2 years ago
- Codes and models for the paper "Learning Unknown from Correlations: Graph Neural Network for Inter-novel-protein Interaction Prediction".☆82Feb 8, 2022Updated 4 years ago
- A deep learning framework for essential gene prediction☆12Aug 17, 2020Updated 6 years ago
- Peptide library design☆23Sep 8, 2020Updated 6 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Grid Generation☆11Mar 7, 2024Updated 2 years ago
- A fast and scalable CUDA implementation to conduct highly parallelized evolutionary tests and viral simulations at scale. Related manuscr…☆16Apr 12, 2026Updated 6 months ago
- Many algorithms for imbalanced data support binary and multiclass classification only. This approach is made for mulit-label classificati…☆14Jun 2, 2024Updated 2 years ago
- Effect of tokenization on transformers for biological sequence☆24Dec 31, 2025Updated 10 months ago
- This workflow includes Quantitative Structure-Activity Relationship (QSAR) models to predict the hERG-related cardiotoxicity of chemicals…☆10Jul 21, 2022Updated 4 years ago
- ☆10Jun 20, 2024Updated 2 years ago
- Quantum Refinement Module☆36Updated this week
- CryoNet.Refine: A One-step Diffusion Model for Rapid Refinement of Structural Models with Cryo-EM Density Map Restraints☆17Updated this week
- Code for Fold2Seq paper from ICML 2021☆50May 25, 2022Updated 4 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- TensorFlow中文教程☆11Oct 21, 2016Updated 10 years ago
- Molecular Mechanics Poisson-Boltzmann Surface Area (MMPBSA) calculations in protein-protein and protein-ligand systems☆11Mar 30, 2022Updated 4 years ago
- The ELN custom schemas from synthesis experiments☆11Aug 5, 2025Updated last year
- AlphaLink: Integrating crosslinking MS data into OpenFold☆77Updated this week
- ☆19Jan 13, 2023Updated 3 years ago
- CryoBoltz code for protein structure prediction with cryo-EM guidance. NeurIPS 2025.☆43Nov 30, 2025Updated 11 months ago
- Unlocking Generative Diversity in Co-Folding Models via Training-Free Conditioning Perturbation☆11Oct 14, 2026Updated 2 weeks ago
- Custom notebook extension that utilizes a new domain specific language, Chemical Markdown Language (CMDL), to assist in documentation of …☆17Sep 10, 2026Updated last month
- Notebook for standardization of actvity data, nonadditivity analysis and its evaluation.☆12Mar 16, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- [ICLR 2024] Official Implementation of Long-Short-Range Message-Passing☆19Sep 7, 2025Updated last year
- Python program, based on Prody, for pathogenicity prediction of human missense variants☆10Jun 29, 2021Updated 5 years ago
- ☆12Mar 12, 2026Updated 7 months ago
- ☆35Oct 21, 2026Updated last week
- ☆15Sep 28, 2026Updated last month
- ☆32Jul 31, 2026Updated 3 months ago
- pKa estimates for proteins using an ensemble approach☆31Jul 24, 2026Updated 3 months ago