xialab-ahu / ETFCLinks
Deep learning-based multi-functional therapeutic peptides prediction with a multi-label focal dice loss function
☆9Updated 11 months ago
Alternatives and similar repositories for ETFC
Users that are interested in ETFC are comparing it to the libraries listed below
Sorting:
- ☆12Updated last year
- ☆8Updated 3 months ago
- Geometry-aware protein binding site predictor☆21Updated 9 months ago
- We propose PepBCL, a novel BERT (Bidirectional Encoder Representation from Transformers)-based Contrastive Learning framework to predict …☆15Updated 2 years ago
- webserver☆23Updated this week
- ☆33Updated 2 years ago
- contrastive learning and pre-trained encoder for protein-ligand binding sites prediction☆30Updated 5 months ago
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆41Updated 10 months ago
- ☆18Updated 3 months ago
- Repository for paper Nanobody–antigen interaction prediction with ensemble deep learning and prompt-based protein language models.☆36Updated 5 months ago
- Nature Computational Science: Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model☆30Updated 3 weeks ago
- Application of deep generative model discovers novel and diverse functional peptides against microbial resistance☆10Updated 2 years ago
- Accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model☆20Updated 9 months ago
- ☆11Updated 9 months ago
- TEIM: TCR-Epitope Interaction Modeling☆49Updated last year
- ☆44Updated last year
- The implementation of the paper sAMPpred-GAT: Prediction of Antimicrobial Peptide by Graph Attention Network and Predicted Peptide Struct…☆31Updated 2 years ago
- ☆41Updated last month
- ☆13Updated 5 months ago
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆32Updated last year
- ☆33Updated last year
- A novel graph neural network strategy with the Vina distance optimization terms to predict protein-ligand binding affinity☆31Updated last year
- ☆18Updated 7 months ago
- Transformer Based Language Model for Peptide Property Prediction☆46Updated 10 months ago
- A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery☆33Updated 3 weeks ago
- DeepAAI☆31Updated 5 months ago
- A bi-directional attention neural network for compound–protein interaction and binding affinity prediction.☆30Updated 2 years ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆29Updated 11 months ago
- This repository contains scripts, data and jupyter notebooks used to produce the evaluation results in the BioPhi 2021 publication☆17Updated 2 years ago
- ☆42Updated 8 months ago