☆25Mar 15, 2024Updated 2 years ago
Alternatives and similar repositories for MUSE
Users that are interested in MUSE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- pLM-informed E(3) equivariant deep graph neural networks for protein-nucleic acid binding site prediction☆26Apr 24, 2024Updated 2 years ago
- ☆17Nov 19, 2023Updated 2 years ago
- MBP: Multi-task Bioassay Pre-training for Protein-Ligand Binding Affinity Prediction☆21Oct 15, 2024Updated last year
- Protein-protein interacting site predictor using deep graph convolutional network☆11Jan 3, 2023Updated 3 years ago
- ☆122Jul 18, 2025Updated 10 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- EdgeSHAPer: Bond-Centric Shapley Value-Based Explanation Method for Graph Neural Networks☆28Mar 30, 2026Updated last month
- The standalone version / cli-tool of SPOT-Contact-Single available for public use for research purposes.☆16Feb 1, 2024Updated 2 years ago
- ☆79Apr 7, 2026Updated last month
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆89Oct 6, 2025Updated 7 months ago
- This repository contains the code for the work on protein-ligand interaction with GNNs and XAI☆36Jan 3, 2024Updated 2 years ago
- ☆19Feb 25, 2026Updated 3 months ago
- ☆16Feb 27, 2024Updated 2 years ago
- ☆56Aug 3, 2024Updated last year
- ☆43Jul 7, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆19Jan 18, 2026Updated 4 months ago
- Adapting protein language models and contrastive learning for highly-accurate drug-target interaction prediction.☆150May 21, 2025Updated last year
- A deep learning framework for deubiquitnase-substrate interaction identification☆12Jul 31, 2025Updated 9 months ago
- ☆18Jun 27, 2025Updated 11 months ago
- Generator and regressor neural networks for antimicrobial peptides☆25Jan 30, 2024Updated 2 years ago
- Geometry-aware protein binding site predictor☆28Aug 29, 2024Updated last year
- codes for KPGT (Knowledge-guided Pre-training of Graph Transformer)☆122Sep 17, 2024Updated last year
- NeuralMD for Protein-ligand Binding Simulation, Nature Communicaitons 2025 https://www.nature.com/articles/s41467-025-67808-z☆48Nov 4, 2025Updated 6 months ago
- ☆22Mar 30, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆28Oct 15, 2024Updated last year
- Communicative Message Passing for Inductive Relation Reasoning（AAAI-2021）☆36Oct 27, 2022Updated 3 years ago
- A Python 3 version of the protein descriptor package propy☆48Feb 8, 2023Updated 3 years ago
- Code for paper "Rethinking Text-based Protein Understanding: Retrieval or LLM?"☆21Oct 7, 2025Updated 7 months ago
- Official repository of "Multi-level Interaction Modeling for Protein Mutational Effect Prediction"☆11Jun 30, 2024Updated last year
- ☆12May 16, 2020Updated 6 years ago
- Supporting code for doi 10.1021/acs.jcim.0c01344☆23Sep 10, 2022Updated 3 years ago
- ☆35Dec 15, 2023Updated 2 years ago
- ☆15May 29, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Code of “Multi-Modal Deep Learning Enables Ultrafast and Accurate Annotation of Enzymatic Active Sites”☆52Nov 4, 2025Updated 6 months ago
- Interpretable bilinear attention network with domain adaptation improves drug-target prediction.☆145Feb 19, 2023Updated 3 years ago
- Official implementation for ActFound (Nature Machine Intelligence): A bioactivity foundation model using pairwise meta-learning☆45Oct 28, 2024Updated last year
- A simple and efficient llama3 local service deployment solution that supports real-time streaming response and is optimized for common Ch…☆13Jul 31, 2024Updated last year
- A novel graph neural network strategy with the Vina distance optimization terms to predict protein-ligand binding affinity☆32May 16, 2024Updated 2 years ago
- ☆19Sep 5, 2024Updated last year
- ☆140Aug 8, 2024Updated last year