Alternatives and similar repositories for UniPMT

Users that are interested in UniPMT are comparing it to the libraries listed below

• schumacherlab / STAPLER
  STAPLER (Shared TCR And Peptide Language bidirectional Encoder Representations from transformers) is a language model that uses a joint T…
  ☆28Updated 7 months ago
• bm2-lab / PanPep
  ☆51Updated 2 years ago
• viragbioinfo / IMMREP_2022_TCRSpecificity
  ☆20Updated 3 years ago
• antigenomics / tcren-ms
  📝 [Paper] TCRen: predicting TCR-peptide recognition based on residue-level pairwise statistical potential
  ☆24Updated 2 months ago
• wukevin / tcr-bert
  Large language modeling applied to T-cell receptor (TCR) sequences.
  ☆57Updated 3 years ago
• bioinformatics-sannio / ncrna-deep
  Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"
  ☆16Updated 4 years ago
• TencentAILabHealthcare / DeepAIR
  ☆37Updated 2 years ago
• frankligy / DeepImmuno
  Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity
  ☆74Updated 2 years ago
• kadiliissaar / DeePhase
  DeePhase predictor of homotypic liquid-liquid phase separation of proteins & the code associated with the paper "Learning the molecular g…
  ☆18Updated 3 years ago
• TencentAILabHealthcare / ER-BERT
  ☆14Updated 2 years ago
• IdoSpringer / ERGO-II
  ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction
  ☆34Updated 3 years ago
• haiyuan-yu-lab / PIONEER
  ☆28Updated 11 months ago
• regeneron-mpds / TCRAI
  ☆17Updated 4 years ago
• gzBiomedical / EpiScan
  Antibody-Specific Epitope Mapping
  ☆14Updated 2 months ago
• piercelab / tcrmodel2
  ☆45Updated 8 months ago
• jychen01 / PISTE
  ☆25Updated last year
• GreiffLab / manuscript_ab_epitope_interaction
  ☆25Updated last year
• phbradley / TCRdock
  python tools for TCR:peptide-MHC modeling and analysis
  ☆83Updated last year
• biomed-AI / GPSite
  Geometry-aware protein binding site predictor
  ☆25Updated last year
• JiangBioLab / DLpTCR
  Predicting immunogenic peptide recognized by TCR through ensemble deep learning
  ☆17Updated last year
• ShenLab / gMVP
  ☆21Updated 3 years ago
• YihePang / DisoFLAG
  Accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model
  ☆23Updated last year
• schumacherlab / TCRvdb
  TCR validated database
  ☆43Updated 7 months ago
• Guido497 / phase-separation
  ☆15Updated 4 years ago
• Doudna-lab / GARNET_DL
  ☆36Updated 10 months ago
• FPPGroup / CodonBERT
  CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.
  ☆42Updated last year
• GfellerLab / MixMHC2pred
  HLA-II ligand predictor.
  ☆45Updated 2 years ago
• njpipeorgan / L1000-bayesian
  L1000 peak deconvolution based on Bayesian analysis
  ☆26Updated 4 years ago
• XSLiuLab / TLimmuno2
  TLimmuno2: predicting MHC class II antigen immunogenicity through transfer learning
  ☆12Updated 2 years ago
• xinyu-dev / annotate_v
  Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python
  ☆30Updated 2 years ago