wltrimbl / thumbnailpolishLinks
Scripts to visualize the thumbnail images from illumina sequencing machines
☆14Updated 9 years ago
Alternatives and similar repositories for thumbnailpolish
Users that are interested in thumbnailpolish are comparing it to the libraries listed below
Sorting:
- An automated post sequencing data processing pipeline for Illumina HiSeq☆14Updated last month
- A Framework to call Structural Variants from NGS based datasets☆22Updated 7 years ago
- full taxonomer cython repository☆22Updated 5 years ago
- An ultra fast and accurate paired-end adapter trimmer that needs no a priori adapter sequences.☆22Updated 4 years ago
- Error correction and variant calling algorithm for nanopore sequencing☆26Updated 9 years ago
- A simple variant calling and annotation pipeline using BWA, GATK and ENSEMBL. This version of the pipeline uses the Rubra/Ruffus framewor…☆34Updated 11 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated 11 months ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- A Perl extension and collection of utilities for Next-Generation Sequencing (NGS) data analysis☆23Updated 6 years ago
- The original version of MGA has been archived - please see https://github.com/crukci-bioinformatics/mga2 instead.☆25Updated 4 years ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆24Updated 9 years ago
- program for haplotype phasing from sequence reads and related tools☆25Updated 6 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated 10 months ago
- Processing and analysis of data coming from Illumina sequencing machines☆10Updated 3 weeks ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 7 years ago
- Assemble the Genome in a Bottle sequencing data☆10Updated 7 years ago
- Whole Exome/Whole Genome Sequencing alignment pipeline☆28Updated 8 months ago
- ☆19Updated 8 years ago
- A Demultiplexing Tool for Illumina Sequencers☆10Updated 8 years ago
- A comprehensive toolkit for running Oxford Nanopore's MinION☆12Updated 6 years ago
- fastq quality assessment and filtering tool☆18Updated 2 years ago
- Wrapper for RTG's vcfeval; DEPRECATED!☆21Updated 9 years ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated 2 years ago
- Docker image of JBrowse Genome Browser☆15Updated 4 years ago
- smCounter: a versatile UMI-aware variant caller to detect both somatic and germline SNVs and indels. Published in article "Detecting very…☆20Updated 6 years ago
- ☆9Updated 8 years ago
- What's The Function of these genes?☆22Updated 8 years ago
- FRAMA: From RNA-seq data to annotated mRNA assemblies☆12Updated 6 years ago
- Mapping-free variant caller for short-read Illumina data☆19Updated 5 years ago
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Updated last year