wltrimbl / thumbnailpolishLinks
Scripts to visualize the thumbnail images from illumina sequencing machines
☆14Updated 9 years ago
Alternatives and similar repositories for thumbnailpolish
Users that are interested in thumbnailpolish are comparing it to the libraries listed below
Sorting:
- full taxonomer cython repository☆22Updated 6 years ago
- An automated post sequencing data processing pipeline for Illumina HiSeq☆14Updated 3 months ago
- A Perl extension and collection of utilities for Next-Generation Sequencing (NGS) data analysis☆23Updated last month
- program for haplotype phasing from sequence reads and related tools☆25Updated 7 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 4 years ago
- Maximum likelihood demultiplexing☆50Updated 9 months ago
- Analysis tool for Nanopore sequencing data☆34Updated 6 years ago
- Ultra-efficient taxonomic mapping of NGS data☆51Updated 4 years ago
- A tool to reduce the size of Oxford Nanopore Technologies' datasets without losing information☆30Updated 2 years ago
- Blast2Bam uses the XML results of Blastn, the reference and the fastQ or fasta file(s) to output a SAM file.☆50Updated 4 years ago
- Wrapper for RTG's vcfeval; DEPRECATED!☆21Updated 9 years ago
- Scripts for implementing read until and other examples.☆31Updated 5 years ago
- High-performance error correction for Illumina resequencing data☆73Updated 9 years ago
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆30Updated 4 years ago
- A method to identify structural variation from sequencing data in target regions☆32Updated 5 years ago
- Various scripts and recipes for working with nanopore data☆34Updated 9 years ago
- A toolkit for annotation of transposable element families from unassembled sequence reads☆30Updated 2 years ago
- for visual evaluation of read support for structural variation☆55Updated last year
- Assembler for raw de novo genome assembly of long uncorrected reads.☆36Updated 6 years ago
- An awk-like VCF parser☆56Updated last year
- A Python library for reading and writing PacBio® data files☆41Updated 2 months ago
- Assembly by Reduced Complexity (ARC)☆42Updated 9 years ago
- Workflows I find helpful for fungal genome annotation☆21Updated 2 years ago
- Minor Variant Calling and Phasing Tools☆15Updated 3 years ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆50Updated last week
- Error correction for Oxford Nanopore data☆47Updated 4 years ago
- smCounter: a versatile UMI-aware variant caller to detect both somatic and germline SNVs and indels. Published in article "Detecting very…☆20Updated 6 years ago
- A toolkit for performing set operations - union, intersection and complement - on k-mer lists.☆34Updated 3 years ago
- Find Unique genomic Regions☆32Updated last month
- UCSC Nanopore☆44Updated 6 years ago