westlake-repl / ProteinLM-TDG2-MutationLinks
Protein language models-assisted optimization of a uracil-N-glycosylase variant enables programmable T-to-G and T-to-C base editing
☆18Updated last year
Alternatives and similar repositories for ProteinLM-TDG2-Mutation
Users that are interested in ProteinLM-TDG2-Mutation are comparing it to the libraries listed below
Sorting:
- Making Protein Modeling Accessible to All Biologists☆115Updated last week
- PLM based active learning model for protein engineering☆82Updated last year
- Protein language model trained on coding DNA☆47Updated 9 months ago
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆154Updated 3 months ago
- Pro-FSFP: Few-Shot Protein Fitness Prediction☆91Updated 2 months ago
- ☆38Updated 3 years ago
- Predicting high-fitness mutations based on protein inverse folding models☆45Updated last week
- ProTrek: Navigating the Protein Universe through Tri-Modal Contrastive Learning☆121Updated last month
- Text-guided protein design☆81Updated 4 months ago
- Learning the language of protein-protein interactions☆88Updated 3 weeks ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆63Updated 3 weeks ago
- ☆81Updated last year
- The first large protein language model trained follows structure instructions.☆84Updated 2 months ago
- Code for ColabDock paper☆142Updated 3 months ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆116Updated 4 months ago
- Generative Language Modeling for Antibody Design☆159Updated 10 months ago
- Public repository describing training and testing of AntiBERTa.☆60Updated 2 years ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆65Updated last year
- ☆68Updated 10 months ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆60Updated last year
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆78Updated last year
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆155Updated last year
- RNA Multiple Sequence Alignment☆43Updated 2 years ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆70Updated last month
- Improved antibody structure-based design using inverse folding☆129Updated 3 months ago
- open source code for Tencent tFold☆106Updated 4 months ago
- 🧬 Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)☆130Updated 2 months ago
- predicting peptide-protein interactions☆132Updated last year
- FuncFetch workflow scripts☆11Updated 2 months ago
- A generalized enzyme kinetics parameter prediction model.☆55Updated last month