tkkarjal / magia
Automated brain PET analysis pipeline
☆27Updated last year
Related projects ⓘ
Alternatives and complementary repositories for magia
- Multi-site dMRI harmonization☆46Updated 9 months ago
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆45Updated this week
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline☆51Updated 8 months ago
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆61Updated this week
- DICOM to NIfTI conversion, NIfTI tools☆90Updated 3 months ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆44Updated 3 months ago
- Single Shell Free Water Elimination Model for Diffusion Tensor Imaging☆22Updated 10 months ago
- Partial Volume Correction in PET☆54Updated 10 months ago
- Automated Fiber Quantification☆75Updated 8 months ago
- ☆32Updated 2 years ago
- dMRI based fiber tracking using parallel transport tractography☆18Updated 2 weeks ago
- Dynamic Contrast Enhanced (DCE) MRI Analysis Software☆48Updated 5 months ago
- APPIAN is an open-source automated software pipeline for analyzing PET images in conjunction with MRI. The goal of APPIAN is to make PET …☆40Updated 2 months ago
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆60Updated 4 months ago
- ☆24Updated 10 months ago
- List of open-source quantitative susceptibility mapping (QSM) MRI software packages and data☆60Updated last year
- Microscopic diffusion anisotropy imaging made easy!☆22Updated 5 years ago
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆97Updated 2 months ago
- Scripts to prepare MP2RAGE for Freesurfer☆23Updated last year
- mrQ_BoxJoinBox☆21Updated last year
- niimath - a clone of fslmaths. Try the live demo:☆55Updated 2 months ago
- Automated white matter lesion segmentation☆9Updated 7 years ago
- White matter tractography clustering and more...☆69Updated 4 months ago
- Hongfu Sun's MATLAB codes for QSM reconstruction pipeline.☆72Updated 4 months ago
- MATLAB code for Multidimensional Diffusion MRI☆42Updated 2 months ago
- PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sh…☆26Updated last week
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆57Updated last week
- Reproduce the artice Hoy et al. 2014 Optimization of a free water elimination two-compartment model for diffusion tensor imaging. Neuroim…☆12Updated 5 years ago
- MP2RAGE Scripts - T1 map correction & Background noise removal☆51Updated last year
- Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variabl…☆83Updated 5 months ago