Microbiome-based disease prediction with multimodal variational information bottlenecks, Grazioli et al., PLOS Computational Biology 2022
☆25Apr 12, 2022Updated 4 years ago
Alternatives and similar repositories for microbiome-mvib
Users that are interested in microbiome-mvib are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code for "Attentive Variational Information Bottleneck for TCR-peptide Interaction Prediction", Grazioli et al., Bioinformatics 2022☆23Jan 10, 2023Updated 3 years ago
- ☆11May 3, 2022Updated 4 years ago
- BiomeNED main code☆12Jul 25, 2019Updated 7 years ago
- ☆18Jan 30, 2023Updated 3 years ago
- Analyses in R and Python Using curatedMetagenomicData☆38Nov 16, 2025Updated 8 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆19Feb 3, 2023Updated 3 years ago
- This is for Meridian (Traditional Chinese Medicine conception) prediction by machining learning method.☆12Sep 30, 2019Updated 6 years ago
- Deep representation learning for disease prediction based on microbiome data☆65Apr 21, 2023Updated 3 years ago
- Deep Generative Models: Diffusion Models for Molecule Generation☆10Jun 17, 2024Updated 2 years ago
- Analysis framework for integrating gut microbiome and host gene expression data☆36Apr 25, 2022Updated 4 years ago
- ☆10Feb 21, 2022Updated 4 years ago
- ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction☆36Apr 1, 2022Updated 4 years ago
- Prototype graphical user interface for QIIME 2☆15Feb 27, 2023Updated 3 years ago
- mbImpute: an accurate and robust imputation method for microbiome data☆13Aug 19, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆16Nov 5, 2021Updated 4 years ago
- 中医药术语识别，使用CNN-BILSTM-CRF模型对9000条训练数据和1000条测试数据进行处理，最终测试数据正确率为90+%。为方便使用，使用Tkinter对模型进行封装使用☆12Feb 21, 2020Updated 6 years ago
- TensorFlow-Implementation of Deep Archetypal Analysis☆12Aug 4, 2021Updated 4 years ago
- ☆30Apr 3, 2025Updated last year
- ☆16Aug 11, 2021Updated 4 years ago
- An R package for learning log-ratio biomarkers from high-throughput sequencing data.☆23Mar 31, 2023Updated 3 years ago
- Code for the paper: "Supervised contrastive learning over prototype-label embeddings for network intrusion detection"☆15Jun 7, 2021Updated 5 years ago
- Creates Venn diagrams for OrthoMCL output☆17Aug 9, 2017Updated 8 years ago
- 新型冠状病毒肺炎防疫指南☆16Mar 5, 2020Updated 6 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆19May 15, 2023Updated 3 years ago
- DNAscan2 is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring v…☆14May 7, 2024Updated 2 years ago
- ☆19Nov 26, 2020Updated 5 years ago
- predicting peptide and TCR interaction☆20Jan 27, 2021Updated 5 years ago
- This repository contains code for the paper "Uncertainty Estimation and Calibration with Finite-State Probabilistic RNNs" (Wang, Lawrence…☆17Mar 8, 2021Updated 5 years ago
- This package is archived and further developed under the name RFSurrogates. In this R-package functions are provided to select important …☆11Jul 27, 2023Updated 3 years ago
- 一个全流程AI科研辅助平台，通过API驱动的智能绘图、深度文献分析和自动化流程图生成，将前沿大型语言模型（LLM）无缝集成到科研工作流中。☆16Jul 15, 2025Updated last year
- Microbial Whole Genome Sequence data analysis labs for 2014☆29Jul 31, 2020Updated 5 years ago
- Pembrolizumab-like Antibody Hallucination using AlphaFold2☆16Nov 10, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Phylogenetic Isometric Log Ratio☆19Apr 1, 2026Updated 3 months ago
- ☆11Aug 2, 2025Updated 11 months ago
- Microbial community-scale metabolic modeling predicts personalized short-chain-fatty-acid production profiles in the human gut☆10Jun 25, 2024Updated 2 years ago
- ☆26Aug 10, 2023Updated 2 years ago
- This project proposes to contribute to fill the knowledge gap about Covid-19SARS-CoV-2 in Brazil and with the global knowledge about the …☆14Apr 27, 2023Updated 3 years ago
- ACMP: Allen-Cahn Message Passing with Attractive and Repulsive Forces for Graph Neural Networks(ICLR 2023)☆22Nov 3, 2023Updated 2 years ago
- ☆17Dec 8, 2021Updated 4 years ago