veg / SARS-CoV-2Links
Daily analyses of genomic SARS-CoV-2 data
☆14Updated 2 years ago
Alternatives and similar repositories for SARS-CoV-2
Users that are interested in SARS-CoV-2 are comparing it to the libraries listed below
Sorting:
- Course Materials for EN.601.452 / AS.020.415 Computational Biomedical Research & Advanced Biomedical Research☆13Updated 3 years ago
- MView extracts and reformats the results of a sequence database search or multiple alignment.☆32Updated last year
- CoV-Seq: COVID-19 Genomic Sequence Database and Visualization☆15Updated 5 years ago
- antimicrobial peptide prediction in R☆33Updated 10 months ago
- Python Implementation of Codon Adaption Index☆37Updated 2 years ago
- A Python package for mapping sequence aligned data onto protein structures☆36Updated 4 years ago
- DeepSig - Predictor of signal peptides in proteins based on deep learning☆26Updated 2 years ago
- ☆15Updated 9 years ago
- A high-fidelity E. coli RNA-seq compendium☆33Updated 4 years ago
- Code for LazyAF pipeline☆21Updated last year
- SARS-CoV-2 RBD antibody escape calculator☆12Updated 11 months ago
- Find common blocks and differences between DNA sequences☆42Updated 6 months ago
- Package that facilitates pulling database entries from KEGG via its REST API☆11Updated 2 years ago
- Protein Sequence Annotation with Language Models☆24Updated 4 months ago
- Natural Product Discovery tools -- a toolkit containing various pipelines for in silico analysis of natural product mass spectrometry da…☆28Updated 3 years ago
- Ancestral Sequence Reconstruction in Python☆14Updated 6 years ago
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆34Updated 2 years ago
- A tutorial on how to set up a Linux environment on a computer running Windows 10. Followed by how to install and use (bio)conda.☆43Updated last year
- An RNA manipulation library.☆56Updated last year
- 🎨 Python library to plot multi-part genetic constructs☆25Updated 6 months ago
- ☆16Updated 2 years ago
- Open source short linear motif discovery and sequence analysis☆25Updated last year
- Methods for mapping genomic data onto 3D protein structure.☆28Updated 3 years ago
- Prediction of protein substitution impact using a directional substitution matrix and homolog alignments☆12Updated 4 years ago
- software for the analysis and visualization of deep mutational scanning data☆34Updated 3 years ago
- Proteins as words, genomes as documents.☆19Updated 4 years ago
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆27Updated 9 months ago
- Python interface to amino acid properties and IEDB☆57Updated last year
- Python package and command line tool for epitope prediction☆52Updated last year
- A bioinformatics best-practice analysis pipeline for epitope prediction and annotation☆47Updated last week