veg / SARS-CoV-2Links
Daily analyses of genomic SARS-CoV-2 data
☆14Updated 3 years ago
Alternatives and similar repositories for SARS-CoV-2
Users that are interested in SARS-CoV-2 are comparing it to the libraries listed below
Sorting:
- Python Implementation of Codon Adaption Index☆37Updated 2 years ago
- Natural Product Discovery tools -- a toolkit containing various pipelines for in silico analysis of natural product mass spectrometry da…☆28Updated 3 years ago
- antimicrobial peptide prediction in R☆33Updated 11 months ago
- Course Materials for EN.601.452 / AS.020.415 Computational Biomedical Research & Advanced Biomedical Research☆13Updated 4 years ago
- Methods for mapping genomic data onto 3D protein structure.☆28Updated 3 years ago
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆30Updated 11 months ago
- DeepSig - Predictor of signal peptides in proteins based on deep learning☆27Updated 2 years ago
- Ancestral Sequence Reconstruction in Python☆14Updated 6 years ago
- SARS-CoV-2 RBD antibody escape calculator☆12Updated last year
- ☆15Updated 9 years ago
- Count and compare 16S rRNA genes within a genus☆16Updated last year
- A platform to do RNA science☆27Updated 4 years ago
- A Python package for mapping sequence aligned data onto protein structures☆36Updated 4 years ago
- A parallel API crawler for the retrieval of Kyoto Encyclopedia of Genes and Genomes metabolic and genomics data.☆21Updated 2 years ago
- CoV-Seq: COVID-19 Genomic Sequence Database and Visualization☆15Updated 5 years ago
- MOLeculAR structure annoTator☆33Updated last year
- MView extracts and reformats the results of a sequence database search or multiple alignment.☆32Updated last year
- ☆29Updated last year
- RNA Structural Covariation Above Phylogenetic Expectation☆18Updated last month
- Package that facilitates pulling database entries from KEGG via its REST API☆11Updated 2 years ago
- A bioinformatics best-practice analysis pipeline for epitope prediction and annotation☆49Updated 3 weeks ago
- Dashboard for analysis of liquid chromatography (tandem) mass spectrometry data.☆32Updated last month
- Observed substitution counts of SARS-CoV-2 compared to those expected under the mutation rates☆21Updated last year
- A package for making tree-based visualizations for embedding vectors☆10Updated 2 years ago
- Protein Sequence Annotation with Language Models☆25Updated this week
- Python interface to amino acid properties and IEDB☆57Updated last year
- Code for LazyAF pipeline☆21Updated last year
- Maximum likelihood structural phylogenetics by including Foldseek 3Di characters. Supporting Information for Puente-Lelievre et al. 2023n…☆22Updated 7 months ago
- Multiple sequence alignment visualizer☆30Updated 2 years ago
- Template-based RNA secondary structure visualization☆26Updated last year