unmtransinfo / ProteinGraphMLLinks
Protein Graph in Python for MetaPath-ML and more.
☆20Updated 7 months ago
Alternatives and similar repositories for ProteinGraphML
Users that are interested in ProteinGraphML are comparing it to the libraries listed below
Sorting:
- Library of Integrated Cellular Signatures L1000☆31Updated 3 years ago
- code for Gogleva et al manuscript☆47Updated 3 years ago
- Template with code & dataset for the "Structural basis for solubility in protein expression systems" challenge at the Copenhagen Bioinfor…☆22Updated 4 years ago
- Methods for mapping genomic data onto 3D protein structure.☆28Updated 3 years ago
- Code to build the Target Central Resource Database (TCRD).☆11Updated 4 years ago
- End-to-end deep learning toolkit for predicting protein binding sites and motifs.☆45Updated 6 years ago
- python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.☆34Updated last year
- Function prediction using a deep ontology-aware classifier☆85Updated 3 years ago
- A project to capture biological pathway data from academic papers☆29Updated 10 months ago
- Provided files are a partial extraction of the Orphanet knowledge base on Rare Diseases☆53Updated last month
- ☆20Updated 5 years ago
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.☆67Updated 2 months ago
- Comprehensive Resource of Biomedical Relations with Deep Learning Applications and Knowledge Graph Representations☆33Updated 2 years ago
- Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your co…☆75Updated 2 years ago
- PAgeRAnk-flux on Graphlet-guided network for multi-Omic data integratioN - Network Inference☆11Updated last year
- ☆25Updated 3 years ago
- Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox☆20Updated 6 years ago
- 🪝 What's the latest version for each database?☆28Updated this week
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆36Updated last year
- StarGazer is a tool designed for rapidly assessing drug repositioning opportunities. It combines multi-source, multi-omics data with a no…☆35Updated 2 years ago
- Orientation of the protein-protein interaction network using network diffusion techniques☆15Updated 4 years ago
- The Complete Python Antibody Library☆24Updated 2 months ago
- Code to accompany the "Implications of Topological Imbalance for Representation Learning on Biomedical Knowledge Graphs" (Briefings in B…☆19Updated 2 weeks ago
- A Standard Database for Drug Repositioning☆19Updated 8 years ago
- Network-based project to explore gene connectivity through biological scales☆23Updated last year
- A deep learning model to predict anticancer peptides.☆24Updated 6 years ago
- A Python package for drug discovery by analyzing causal paths on multiscale networks☆28Updated last year
- Homology reduced UniProt, train-/valid-/testsets for language modeling☆16Updated 3 years ago
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆66Updated 3 years ago
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆29Updated 11 months ago