Alternatives and similar repositories for ProteinGraphML

Users that are interested in ProteinGraphML are comparing it to the libraries listed below

• dhimmel / lincs
  Library of Integrated Cellular Signatures L1000
  ☆31Updated 3 years ago
• ProteinQure / cbh21-protein-solubility-challenge
  Template with code & dataset for the "Structural basis for solubility in protein expression systems" challenge at the Copenhagen Bioinfor…
  ☆22Updated 4 years ago
• Orbifold / drug-repurposing
  Drug Repurposing using TigerGraph and Graph Machine Learning.
  ☆18Updated 3 years ago
• AstraZeneca / skywalkR
  code for Gogleva et al manuscript
  ☆45Updated 2 years ago
• bio-ontology-research-group / deepgo
  Function prediction using a deep ontology-aware classifier
  ☆84Updated 2 years ago
• cansyl / CROssBAR
  Comprehensive Resource of Biomedical Relations with Deep Learning Applications and Knowledge Graph Representations
  ☆30Updated last year
• baranwa2 / MetabolicPathwayPrediction
  ☆36Updated last year
• twoXes / awesome-structural-bioinformatics
  Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your co…
  ☆72Updated 2 years ago
• reactome / reactome2py
  python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.
  ☆33Updated last year
• alrojo / UniLanguage
  Homology reduced UniProt, train-/valid-/testsets for language modeling
  ☆17Updated 3 years ago
• unmtransinfo / TCRD
  Code to build the Target Central Resource Database (TCRD).
  ☆11Updated 4 years ago
• Orphanet / Orphadata_aggregated
  Provided files are a partial extraction of the Orphanet knowledge base on Rare Diseases
  ☆50Updated last month
• danasilv / Diffuse2Direct
  Orientation of the protein-protein interaction network using network diffusion techniques
  ☆15Updated 4 years ago
• menchelab / MultiOme
  Network-based project to explore gene connectivity through biological scales
  ☆23Updated 9 months ago
• mikejhuang / PhageProtVec
  Amino Acid Embedding Representation as Machine Learning Features
  ☆19Updated 7 years ago
• wikipathways / pywikipathways
  Python Client Package for WikiPathways
  ☆21Updated 2 months ago
• MedChaabane / deepRAM
  End-to-end deep learning toolkit for predicting protein binding sites and motifs.
  ☆45Updated 6 years ago
• kexinhuang12345 / ml-genomics-resources
  Machine Learning for Genomics and Therapeutics Resources (Cell Patterns)
  ☆79Updated 3 years ago
• Case-esaC / iDrug
  ☆19Updated 5 years ago
• mickaelleclercq / BioDiscML
  Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data
  ☆31Updated 3 weeks ago
• sbl-sdsc / mmtf-genomics
  Methods for mapping genomic data onto 3D protein structure.
  ☆28Updated 3 years ago
• JaesikKim / HiG2Vec
  ☆23Updated 2 years ago
• eugenebang / DREAMwalk
  The official code implementation for DREAMwalk in Python.
  ☆22Updated 2 years ago
• drug2ways / drug2ways
  A Python package for drug discovery by analyzing causal paths on multiscale networks
  ☆27Updated last year
• OATML / EVE
  Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…
  ☆67Updated 2 years ago
• johli / scrambler
  Interpretation by Deep Generative Masking for Biological Sequences
  ☆37Updated 3 years ago
• HannesStark / protein-localization
  Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…
  ☆64Updated last year
• PaccMann / paccmann_predictor
  PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…
  ☆52Updated this week
• boscoh / uniprot
  retrieve protein sequence identifiers and metadata from http://uniprot.org
  ☆67Updated 3 years ago
• jwillis0720 / sadie
  The Complete Python Antibody Library
  ☆24Updated 3 months ago