unmtransinfo / ProteinGraphMLLinks
Protein Graph in Python for MetaPath-ML and more.
☆20Updated 5 months ago
Alternatives and similar repositories for ProteinGraphML
Users that are interested in ProteinGraphML are comparing it to the libraries listed below
Sorting:
- ☆20Updated 5 years ago
- Library of Integrated Cellular Signatures L1000☆31Updated 3 years ago
- Code to build the Target Central Resource Database (TCRD).☆11Updated 4 years ago
- code for Gogleva et al manuscript☆46Updated 2 years ago
- Template with code & dataset for the "Structural basis for solubility in protein expression systems" challenge at the Copenhagen Bioinfor…☆22Updated 4 years ago
- A deep learning model to predict anticancer peptides.☆23Updated 6 years ago
- Drug Repurposing using TigerGraph and Graph Machine Learning.☆18Updated 3 years ago
- Method for drug repurposing from knowledge graphs and literature☆36Updated 5 years ago
- Methods for mapping genomic data onto 3D protein structure.☆28Updated 3 years ago
- Resources for Drug Repurposing In Alzheimer's Disease (DRIAD) work☆11Updated 4 years ago
- Homology reduced UniProt, train-/valid-/testsets for language modeling☆16Updated 3 years ago
- Comprehensive Resource of Biomedical Relations with Deep Learning Applications and Knowledge Graph Representations☆32Updated 2 years ago
- A Python package for drug discovery by analyzing causal paths on multiscale networks☆28Updated last year
- Orientation of the protein-protein interaction network using network diffusion techniques☆15Updated 4 years ago
- 🪝 What's the latest version for each database?☆27Updated 2 weeks ago
- A Standard Database for Drug Repositioning☆19Updated 8 years ago
- Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data☆31Updated 4 months ago
- ☆26Updated 3 years ago
- Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your co…☆74Updated 2 years ago
- python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.☆34Updated last year
- Network-based project to explore gene connectivity through biological scales☆23Updated last year
- Function prediction using a deep ontology-aware classifier☆84Updated 3 years ago
- StarGazer is a tool designed for rapidly assessing drug repositioning opportunities. It combines multi-source, multi-omics data with a no…☆35Updated 2 years ago
- End-to-end deep learning toolkit for predicting protein binding sites and motifs.☆45Updated 6 years ago
- Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…☆74Updated 2 years ago
- Bioinformatics 2020: Graph Neural Networks for DNA Sequence Classification☆33Updated 4 years ago
- For MHC-I protein-peptide binding predictions: Deep Learning model with CNN and Snakemake workflow☆13Updated 7 years ago
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆28Updated 9 months ago
- The official code implementation for DREAMwalk in Python.☆30Updated 2 years ago