Orbifold / drug-repurposing
Drug Repurposing using TigerGraph and Graph Machine Learning.
☆19Updated 3 years ago
Alternatives and similar repositories for drug-repurposing
Users that are interested in drug-repurposing are comparing it to the libraries listed below
Sorting:
- StarGazer is a tool designed for rapidly assessing drug repositioning opportunities. It combines multi-source, multi-omics data with a no…☆35Updated last year
- A curated list of awesome AI and Bioinformatics.☆45Updated 2 years ago
- Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence…☆33Updated last week
- Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery☆27Updated 4 years ago
- A Python package for drug discovery by analyzing causal paths on multiscale networks☆26Updated 10 months ago
- Supplementary code for the paper: Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19☆27Updated 4 years ago
- A Graph Neural Network Model for prediction of the effectiveness of a drug on a given cancer cell lines☆17Updated 2 years ago
- Amino Acid Embedding Representation as Machine Learning Features☆19Updated 6 years ago
- Protein Graph in Python for MetaPath-ML and more.☆19Updated 3 years ago
- ☆11Updated 5 years ago
- Source code and data repository for "Ensembles of knowledge graph embedding models improve predictions for drug discovery"☆20Updated last year
- A deep learning framework for high-throughput mechanism-driven phenotype screening☆49Updated 4 years ago
- An Integrative Drug Repurposing Pipeline using KNIME and Programmatic Data Access: A case study on COVID-19 Data☆14Updated 4 years ago
- [IJMS 2022] DRPreter: Interpretable Anticancer Drug Response Prediction Using Knowledge-Guided Graph Neural Networks and Transformer☆10Updated 2 years ago
- HoTS: Sequence-based prediction of binding regions and drug-target interactions.☆26Updated 2 years ago
- ☆16Updated 3 years ago
- Code to accompany the "Implications of Topological Imbalance for Representation Learning on Biomedical Knowledge Graphs" (Briefings in B…☆17Updated last week
- Mol2vec notebooks for use with Binder service☆29Updated 7 years ago
- a method for CPI and DTA prediction☆11Updated 2 years ago
- ☆17Updated 8 months ago
- Parameter-efficient embeddings for proteins, pretrained using a contrastive loss.☆29Updated 4 years ago
- ☆12Updated 11 months ago
- Official implementation of DrugGEN: Target Specific De Novo Design of Drug Candidate Molecules with Graph Transformer-based Generative Ad…☆63Updated last month
- This repository provides an implementation of the DTiGEMSplus tool, a network-based method for computational Drug-Target Interaction pred…☆27Updated 3 years ago
- Data-driven chemical-induced toxicity prediction by machine learning using chemical and bioactivity data☆10Updated 8 years ago
- ☆15Updated 2 years ago
- Multi-modal co-attention for drug-target interaction annotation and Its Application to SARS-CoV-2☆17Updated 2 years ago
- Accurate prediction of drug–target interactions in drug discovery.☆10Updated 3 months ago
- Don't worry about DrugBank licensing - write code that knows how to download it automatically☆47Updated 3 months ago
- AlphaDrug: Protein Target Specific De Novo Molecular Generation☆40Updated 2 years ago