Orbifold / drug-repurposingLinks
Drug Repurposing using TigerGraph and Graph Machine Learning.
☆19Updated 3 years ago
Alternatives and similar repositories for drug-repurposing
Users that are interested in drug-repurposing are comparing it to the libraries listed below
Sorting:
- StarGazer is a tool designed for rapidly assessing drug repositioning opportunities. It combines multi-source, multi-omics data with a no…☆35Updated last year
- Official implementation of DrugGEN: Target Specific De Novo Design of Drug Candidate Molecules with Graph Transformer-based Generative Ad…☆65Updated 2 months ago
- Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence…☆33Updated last week
- A curated list of awesome AI and Bioinformatics.☆45Updated 2 years ago
- A Python package for drug discovery by analyzing causal paths on multiscale networks☆27Updated 11 months ago
- TransDTI: Transformer-based language models for estimating DTIs and building a drug-recommendation workflow☆12Updated 2 years ago
- Accurate prediction of drug–target interactions in drug discovery.☆10Updated 4 months ago
- A collection of drug discovery, classification and representation learning papers with deep learning.☆42Updated 3 years ago
- Drug-Drug Interaction Predicting by Neural Network Using Integrated Similarity☆29Updated 4 years ago
- Core code for the paper "A deep learning model for drug response prediction from cancer genomic signatures and compound chemical structur…☆20Updated 3 years ago
- Data-driven chemical-induced toxicity prediction by machine learning using chemical and bioactivity data☆10Updated 8 years ago
- A high throughput automated drug discovery pipeline.☆30Updated 7 years ago
- A computational drug discovery project, in which bioinformatic and machine learning tools are used to identify possible molecular targets…☆22Updated 4 years ago
- Source code and data repository for "Ensembles of knowledge graph embedding models improve predictions for drug discovery"☆20Updated last year
- The official repository for the book "Machine Learning for Drug Discovery" (Manning Publications)☆40Updated 2 months ago
- A Graph Neural Network Model for prediction of the effectiveness of a drug on a given cancer cell lines☆17Updated 2 years ago
- Multi-modal co-attention for drug-target interaction annotation and Its Application to SARS-CoV-2☆17Updated 2 years ago
- Machine learning notebooks and code used for demonstration purposes☆24Updated 4 years ago
- Python package is for paper 'Predicting potential drug-drug interactions by integrating chemical, biological, phenotypic and network data…☆36Updated 8 years ago
- A collection of resources for Deep Learning in Python for Life Sciences (with focus on biotech and pharma).☆135Updated this week
- Don't worry about DrugBank licensing - write code that knows how to download it automatically☆48Updated 4 months ago
- Introduction to Applied Mathematics and Informatics in Drug Discovery (AMIDD)☆32Updated 6 months ago
- code for Zagidullin et al 2021 "Comparative analysis of molecular fingerprints in prediction of drug combination effects"☆16Updated 2 years ago
- Supplementary code for the paper: Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19☆27Updated 4 years ago
- Code to accompany the "Implications of Topological Imbalance for Representation Learning on Biomedical Knowledge Graphs" (Briefings in B…☆17Updated last week
- A free and collaborative space for Machine Learning 🤖 applied to Biology 🧬☆37Updated 10 months ago
- [Briefings in Bioinformatics] A Survey of Generative AI for de novo Drug Design☆85Updated 6 months ago
- Mol2vec notebooks for use with Binder service☆29Updated 7 years ago
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆51Updated last year
- Fine-tuning of ChemBERTA LLMs to predict molecules' HIV inhibition replication.☆27Updated last year