Orbifold / drug-repurposingLinks
Drug Repurposing using TigerGraph and Graph Machine Learning.
☆19Updated 3 years ago
Alternatives and similar repositories for drug-repurposing
Users that are interested in drug-repurposing are comparing it to the libraries listed below
Sorting:
- StarGazer is a tool designed for rapidly assessing drug repositioning opportunities. It combines multi-source, multi-omics data with a no…☆35Updated last year
- Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence…☆34Updated last month
- A Python package for drug discovery by analyzing causal paths on multiscale networks☆27Updated 11 months ago
- A collection of drug discovery, classification and representation learning papers with deep learning.☆42Updated 3 years ago
- Official implementation of DrugGEN: Target Specific De Novo Design of Drug Candidate Molecules with Graph Transformer-based Generative Ad…☆64Updated 2 months ago
- Supplementary code for the paper: Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19☆27Updated 4 years ago
- Readings for "A Unified View of Relational Deep Learning for Drug Pair Scoring." (IJCAI 2022)☆94Updated 2 years ago
- Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery☆28Updated 4 years ago
- Data-driven chemical-induced toxicity prediction by machine learning using chemical and bioactivity data☆10Updated 8 years ago
- Source code and data repository for "Ensembles of knowledge graph embedding models improve predictions for drug discovery"☆20Updated last year
- ☆27Updated 5 years ago
- A computational drug discovery project, in which bioinformatic and machine learning tools are used to identify possible molecular targets…☆22Updated 4 years ago
- Target prediction multitask neural network, with examples running it in Python, C++, Julia and JS☆16Updated 3 months ago
- A curated list of awesome AI and Bioinformatics.☆45Updated 2 years ago
- DeepDrugDomain: A versatile Python toolkit for streamlined preprocessing and accurate prediction of drug-target interactions and binding …☆23Updated 7 months ago
- ☆14Updated 2 years ago
- A high throughput automated drug discovery pipeline.☆29Updated 7 years ago
- Drug-Drug Interaction Predicting by Neural Network Using Integrated Similarity☆29Updated 4 years ago
- Drug-Drug Interaction Prediction Based on Knowledge Graph Embeddings and Convolutional-LSTM Network☆90Updated 5 years ago
- Amino Acid Embedding Representation as Machine Learning Features☆19Updated 6 years ago
- Multi-modal co-attention for drug-target interaction annotation and Its Application to SARS-CoV-2☆17Updated 2 years ago
- [IJMS 2022] DRPreter: Interpretable Anticancer Drug Response Prediction Using Knowledge-Guided Graph Neural Networks and Transformer☆10Updated 2 years ago
- Code to accompany the "Implications of Topological Imbalance for Representation Learning on Biomedical Knowledge Graphs" (Briefings in B…☆17Updated last week
- Machine learning notebooks and code used for demonstration purposes☆24Updated 4 years ago
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆51Updated last year
- Code repository for "Prioritizing Repurposable Drugs for SARS-CoV-2 using Deep Learning and Population-based Validation"☆15Updated last month
- TransDTI: Transformer-based language models for estimating DTIs and building a drug-recommendation workflow☆12Updated 2 years ago
- code for Zagidullin et al 2021 "Comparative analysis of molecular fingerprints in prediction of drug combination effects"☆16Updated 2 years ago
- Prediction of compound synthesis accessibility bashed on reaction knowledge graph☆18Updated 3 years ago
- ☆16Updated 3 years ago