Notebooks to introduce biopython
☆143Dec 4, 2020Updated 5 years ago
Alternatives and similar repositories for biopython-notebook
Users that are interested in biopython-notebook are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Biopython Jupyter Notebook tutorial to characterize a small genome☆103Apr 8, 2020Updated 6 years ago
- A basic introduction to Biopython, intended for a classroom based workshop. Now on Codeberg.☆228Apr 11, 2020Updated 6 years ago
- Python for Bioinformatics☆266Oct 1, 2020Updated 6 years ago
- A library for next generation genomics in Python 3☆18Jun 7, 2018Updated 8 years ago
- IPython notebooks to teach Genomics and Population Genetics☆21Feb 13, 2017Updated 9 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆13Sep 1, 2020Updated 6 years ago
- 📦 A Command Line Tool for downloading protein structures, sequences and MSAs☆10Nov 21, 2017Updated 8 years ago
- ☆11Apr 25, 2021Updated 5 years ago
- Dockerfiles to build Biopython instances☆28Aug 30, 2016Updated 10 years ago
- A place to put docker build files☆14Sep 11, 2026Updated last month
- Official git repository for Biopython (originally converted from CVS)☆5,227Updated this week
- Demos of many Rosetta applications☆25Jun 10, 2025Updated last year
- Graph Learning of INTER-protein contacts☆11Feb 20, 2022Updated 4 years ago
- ☆34Sep 19, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- analyze_geo_microarrays.py : Differential expression analysis of published microarrays datasets from the NCBI Gene Expression Omnibus (GE…☆12Aug 1, 2021Updated 5 years ago
- A Python platform for Structural Bioinformatics☆59Jul 14, 2026Updated 3 months ago
- ☆17Mar 11, 2023Updated 3 years ago
- Pandas DataFrames for phylogenetics☆75Jun 6, 2021Updated 5 years ago
- ClusterScan, search for clusters of features in a given annotation.☆10Aug 26, 2021Updated 5 years ago
- python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.☆16Feb 13, 2018Updated 8 years ago
- Circular bacterial genome plots based on BLAST or NUCMER/PROMER alignments☆109Dec 11, 2023Updated 2 years ago
- ☆14Mar 10, 2019Updated 7 years ago
- Improved contact predictions using the recognition of protein like contact patterns.☆14May 18, 2018Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Bioconnector Workshops☆31Dec 10, 2018Updated 7 years ago
- JupyterLab extension for py3Dmol☆23Jan 2, 2022Updated 4 years ago
- A tool for creating Python implementations of SBML models.☆15Oct 5, 2022Updated 4 years ago
- Computational Analysis of Novel Drug Opportunities☆43Jul 23, 2026Updated 2 months ago
- SQL kernel for Jupyter☆12May 18, 2016Updated 10 years ago
- NanoDJ: A Dockerized Jupyter Notebook for Interactive Oxford Nanopore MinION Sequence Manipulation and Genome Assembly☆51Dec 16, 2019Updated 6 years ago
- Alignment editor for Mac OS X☆30Aug 1, 2017Updated 9 years ago
- KDS software for Kinase Drug Selectivity☆10Jun 22, 2026Updated 3 months ago
- Bioinformatics with Python Cookbook Second Edition, published by Packt☆318Aug 23, 2021Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Data Wrangling and Processing for Genomics☆77Oct 6, 2026Updated last week
- Novelty-inclusive microbial (and now dsDNA phage) community profiling of shotgun metagenomes☆196Sep 8, 2026Updated last month
- Work from the book 'Advanced Python for Biologists'☆15Sep 12, 2018Updated 8 years ago
- Scripts to generate and analyze afdb clusters☆11Sep 15, 2023Updated 3 years ago
- Interpretable, protein structure-based prediction of missense variant deleteriousness.☆23Aug 6, 2025Updated last year
- The Vertebrate Genomes Project Mitogenome Assembly Pipeline☆19Mar 26, 2023Updated 3 years ago
- Graphical Representation of Ancestral Sequence Predictions☆15Mar 6, 2023Updated 3 years ago