biopython / biopython.github.io

Related projects: ⓘ

• peterjc / biopython_workshop
  A basic introduction to Biopython, intended for a classroom based workshop
  ☆207Updated 4 years ago
• tiagoantao / bioinf-python
  Python for Bioinformatics
  ☆240Updated 3 years ago
• VoigtLab / dnaplotlib
  DNA plotting library for Python
  ☆287Updated 6 months ago
• chapmanb / bcbb
  Incubator for useful bioinformatics code, primarily in Python and R
  ☆606Updated 7 months ago
• openvax / pyensembl
  Python interface to access reference genome features (such as genes, transcripts, and exons) from Ensembl
  ☆372Updated 3 months ago
• tiagoantao / biopython-notebook
  Notebooks to introduce biopython
  ☆129Updated 3 years ago
• tanghaibao / goatools
  Python library to handle Gene Ontology (GO) terms
  ☆766Updated 2 months ago
• jorvis / biocode
  Bioinformatics code libraries and scripts
  ☆485Updated last month
• PacificBiosciences / Bioinformatics-Training
  ☆389Updated this week
• qiime2 / qiime2
  Official repository for the QIIME 2 framework.
  ☆468Updated this week
• mdshw5 / pyfaidx
  Efficient pythonic random access to fasta subsequences
  ☆450Updated last month
• pysam-developers / pysam
  Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight…
  ☆774Updated 2 months ago
• cokelaer / bioservices
  Access to Biological Web Services from Python.
  ☆278Updated 2 months ago
• biocore / qiime
  Official QIIME 1 software repository. QIIME 2 (https://qiime2.org) has succeeded QIIME 1 as of January 2018.
  ☆285Updated last year
• bioconvert / bioconvert
  Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.
  ☆364Updated 9 months ago
• kblin / ncbi-genome-download
  Scripts to download genomes from the NCBI FTP servers
  ☆932Updated last month
• pysb / pysb
  Python framework for Systems Biology modeling
  ☆165Updated 2 months ago
• bioSyntax / bioSyntax
  Syntax highlighting for computational biology
  ☆252Updated last year
• metagenome-atlas / atlas
  ATLAS - Three commands to start analyzing your metagenome data
  ☆368Updated last month
• bigwiv / Biopython-cn
  Biopython Tutorial Chinese Translation
  ☆226Updated 3 years ago
• stephaneguindon / phyml
  PhyML -- Phylogenetic estimation using (Maximum) Likelihood
  ☆175Updated last week
• PacktPublishing / Bioinformatics-with-Python-Cookbook-Second-Edition
  Bioinformatics with Python Cookbook Second Edition, published by Packt
  ☆300Updated 3 years ago
• pyranges / pyranges
  Performant Pythonic GenomicRanges
  ☆436Updated 3 months ago
• cggh / scikit-allel
  A Python package for exploring and analysing genetic variation data
  ☆287Updated this week
• deeptools / deepTools
  Tools to process and analyze deep sequencing data.
  ☆670Updated 2 weeks ago
• lindenb / jvarkit
  Java utilities for Bioinformatics
  ☆479Updated this week
• tseemann / prokka
  Rapid prokaryotic genome annotation
  ☆819Updated 5 months ago
• deeptools / pyGenomeTracks
  python module to plot beautiful and highly customizable genome browser tracks
  ☆755Updated 2 months ago
• libnano / primer3-py
  Simple oligo analysis and primer design
  ☆157Updated 2 weeks ago
• scikit-bio / scikit-bio
  scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resourc…
  ☆880Updated 2 weeks ago