biopython / biopythonLinks
Official git repository for Biopython (originally converted from CVS)
☆4,665Updated last week
Alternatives and similar repositories for biopython
Users that are interested in biopython are comparing it to the libraries listed below
Sorting:
- scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resourc…☆950Updated last week
- Interactive lessons in bioinformatics.☆845Updated 3 years ago
- A curated list of awesome Bioinformatics libraries and software.☆3,529Updated 3 months ago
- DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.☆3,450Updated last month
- MMseqs2: ultra fast and sensitive search and clustering suite☆1,725Updated last week
- Working with molecular structures in pandas DataFrames☆730Updated 11 months ago
- Source of biopython.org website, migrated from MediaWiki☆157Updated 3 weeks ago
- Open-source foundation of the user-sponsored PyMOL molecular visualization system.☆1,407Updated 3 weeks ago
- COBRApy is a package for constraint-based modeling of metabolic networks.☆509Updated last month
- A list of deep learning implementations in biology☆2,066Updated 11 months ago
- SRA Tools☆1,234Updated this week
- Single-cell analysis in Python. Scales to >100M cells.☆2,130Updated last week
- Scripts to download genomes from the NCBI FTP servers☆1,021Updated 11 months ago
- Python library to plot DNA sequence features (e.g. from Genbank files)☆639Updated last week
- resources for learning bioinformatics☆1,049Updated 6 months ago
- Unix, R and python tools for genomics and data science☆1,288Updated 3 months ago
- A comprehensive library for computational molecular biology☆825Updated last week
- Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight…☆836Updated 3 weeks ago
- Python and C++ code for reading and writing genomics data.☆792Updated 3 years ago
- Collection of bioinformatics training materials☆1,034Updated this week
- Making Protein folding accessible to all!☆2,316Updated last week
- Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis☆1,008Updated 10 months ago
- Supplementary files for my book, "Bioinformatics Data Skills"☆668Updated 6 years ago
- Python library to handle Gene Ontology (GO) terms☆841Updated last month
- Bioinformatics containers☆731Updated 2 months ago
- Applied Computational Genomics Course at UU: Spring 2020☆981Updated last year
- Cloud-native genomic dataframes and batch computing☆1,016Updated last week
- Open Babel is a chemical toolbox designed to speak the many languages of chemical data.☆1,196Updated 4 months ago
- BioJava is an open-source project dedicated to providing a Java library for processing biological data.☆610Updated 3 months ago
- Accelerated BLAST compatible local sequence aligner.☆1,161Updated 2 weeks ago