takanori-fujiwara / ccpcaLinks
ccPCA: contrasting clusters in PCA.
☆21Updated 4 months ago
Alternatives and similar repositories for ccpca
Users that are interested in ccpca are comparing it to the libraries listed below
Sorting:
- A Python Library for Evaluating the Reliability of Dimensionality Reduction Embeddings☆42Updated last month
- Peax is a tool for interactive visual pattern search and exploration in epigenomic data based on unsupervised representation learning wit…☆68Updated 2 years ago
- ☆31Updated 4 years ago
- Progressive Uniform Manifold Approximation and Projection (EuroVis 2020 short)☆13Updated 2 years ago
- "Dimensionality-increasing" data visualization tool and interactive WebGL Jupyter widget built for single-cell data.☆118Updated 2 years ago
- A Jupyter widget for comparing two embeddings with shared labels by their confusion, neighborhoods, and size.☆47Updated 11 months ago
- ☆20Updated 4 years ago
- (PLEASE USE https://github.com/HanKruiger/tsNET) This is here for historical purpose only.☆10Updated 6 years ago
- A JavaScript implementation of Bubble Sets.☆48Updated last year
- Code for the paper on t-SNE with variable degree of freedom☆24Updated 5 years ago
- Python, R and Matlab implementation of Brown's Method to combine dependent P-values☆25Updated 7 years ago
- Attraction-Repulsion Spectrum in Neighbor Embeddings☆31Updated 3 years ago
- Scalable analysis of large high-dimensional data☆66Updated 6 years ago
- Here we address the global structure preservation by tSNE and UMAP☆47Updated 5 years ago
- Creating multi-resolution embeddings and clusters from high dimensional data☆56Updated last year
- Tools for building and manipulating graphs in Python☆43Updated last month
- An interactive heatmap visualization built using D3.js☆235Updated 2 years ago
- Python Wrapper for FIt-SNE☆45Updated 4 years ago
- topological data analysis of population-scale microbiomes☆31Updated 2 years ago
- Notebooks accompanying the paper "Navigating the pitfalls of applying machine learning in genomics"☆45Updated 2 years ago
- An object oriented python library for topological data analysis of high-throughput single-cell RNA-seq data☆52Updated 7 years ago
- Systematically learn and evaluate manifolds from high-dimensional data☆101Updated this week
- ☆18Updated 9 months ago
- UpSet - Visualizing Intersecting Sets☆238Updated 3 years ago
- JavaScript matrix visualization and analysis☆65Updated last year
- A tool for visualizing ABC enhancer-gene connections in the context of genetic variants.☆12Updated 2 years ago
- Contrastive PCA☆226Updated last week
- Archetypal Analysis network (AAnet)☆37Updated 8 months ago
- ☆29Updated 8 years ago
- ☆56Updated 5 years ago