jiaxianyan / BioMinerLinks
A Multi-modal System for Automated Mining of Protein-Ligand Bioactivity Data from Literature
☆60Updated 3 months ago
Alternatives and similar repositories for BioMiner
Users that are interested in BioMiner are comparing it to the libraries listed below
Sorting:
- ☆40Updated 7 months ago
- ☆38Updated 4 months ago
- ☆27Updated last year
- ☆32Updated 2 years ago
- ☆59Updated last year
- DeepRMSD+Vina is a computational framework that integrates ligand binding pose optimization and screening.☆42Updated last year
- ☆69Updated last year
- This Code is for Fragment-wise 3D Structure-based Molecular Generation with Reliable Geometry☆28Updated 7 months ago
- ☆28Updated 3 years ago
- Kinase–drug binding prediction with calibrated uncertainty quantification☆23Updated last year
- ☆38Updated 3 months ago
- Official implementation for LigUnity: Hierarchical affinity landscape navigation through learning a shared pocket-ligand space.☆37Updated last week
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆82Updated 3 weeks ago
- ☆36Updated 3 months ago
- my own studied materials and scripts☆54Updated 2 weeks ago
- The official PyTorch implementation of PGMG: A Pharmacophore-Guided Deep Learning Approach for Bioactive Molecule Generation.☆64Updated last year
- Token-Mol 1.0:tokenized drug design with large language model☆55Updated 2 weeks ago
- ☆28Updated last year
- Implementation of PocketXMol, the pocket-interacting molecular generative foundation model.☆88Updated 2 months ago
- ☆25Updated last year
- FlexPose, a framework for AI-based flexible modeling of protein-ligand binding pose.☆54Updated last year
- Folding-Docking-Affinity framework for protein-ligand affinity prediction☆27Updated 7 months ago
- a multi-property optimization method.☆32Updated 10 months ago
- Deep Site and Docking Pose (DSDP) is a blind docking strategy accelerated by GPUs, developed by Gao Group. For the site prediction part, …☆63Updated 4 months ago
- InteractionGraphNet: a Novel and Efficient Deep Graph Representation Learning Framework for Accurate Protein-Ligand Interaction Predictio…☆47Updated 2 years ago
- Implementation of ICML23 paper "Learning Subpocket Prototypes for Generalizable Structure-based Drug Design"☆30Updated last year
- ☆48Updated 2 years ago
- ☆51Updated 7 months ago
- Comprehensive Benchmark for Protein-Peptide Complex Structure Prediction with AlphaFold3☆16Updated last month
- Incorporation of conformational space profile into molecular representation learning, and its application to drug discovery, including vi…☆61Updated 3 months ago