This is a repository for annotation data for the THYME Project, a clinical natural language processing project dedicated to extracting useful temporal relations from the clinical narrative.
☆37May 21, 2025Updated 10 months ago
Alternatives and similar repositories for thymedata
Users that are interested in thymedata are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ETUDE (Evaluation Tool for Unstructured Data and Extractions) is a Python-based tool that provides consistent evaluation options across a…☆12Jul 22, 2022Updated 3 years ago
- ☆12Apr 13, 2023Updated 2 years ago
- Corpus of Online Medical EnTities: the cometA corpus☆51Mar 6, 2025Updated last year
- Code for Dligach and Miller 2018 paper Learning Patient Representations from Text☆10Apr 2, 2023Updated 3 years ago
- Code for the old version of BioMedICUS, for the new version see the biomedicus3 repository.☆44Mar 13, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Hadoop integration code for working with with Apache cTAKES☆10Feb 11, 2014Updated 12 years ago
- UMLS in Python with MongoDB.☆18Dec 7, 2018Updated 7 years ago
- Code for LSTM based model for PICO element detection☆11Jul 19, 2018Updated 7 years ago
- An Interactive Tool for Natural Language Processing on Clinical Text☆15Aug 20, 2021Updated 4 years ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆35Jan 2, 2024Updated 2 years ago
- ☆98Jul 7, 2023Updated 2 years ago
- [COLING22] Text-to-Text Extraction and Verbalization of Biomedical Event Graphs☆10Nov 5, 2022Updated 3 years ago
- ☆17Mar 31, 2026Updated last week
- This repo contains the knitr code for the paper: Gillespie, C. S., et al, 2010. Analysing yeast time course microarray data using BioCond…☆13Jan 25, 2016Updated 10 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆72May 5, 2025Updated 11 months ago
- ☆17Oct 10, 2019Updated 6 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆344Nov 9, 2021Updated 4 years ago
- ☆11Oct 22, 2018Updated 7 years ago
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆66Jul 10, 2025Updated 9 months ago
- ☆44Jul 13, 2023Updated 2 years ago
- BERT models pretrained on the CORD-19 Kaggle dataset☆15Jun 8, 2020Updated 5 years ago
- Healthcare AI Model Evaluator (HAIME) empowers healthcare organizations to independently evaluate and customize AI solutions, addressing …☆46Feb 17, 2026Updated last month
- Sandbox for playing with Neo4J and graph approaches to NLP☆12Jul 12, 2017Updated 8 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- This is the code for Negation and Speculation Cue Detection and Scope Resolution using BERT, XLNet and RoBERTa☆34Jun 26, 2021Updated 4 years ago
- A library for GNU make to schedule rules as jobs with qsub or sbatch☆11Mar 7, 2013Updated 13 years ago
- Document exploration tool☆12Sep 6, 2016Updated 9 years ago
- Code and data for acl2019 paper "Incremental Learning from Scratch for Task-Oriented Dialogue Systems"☆27Jun 27, 2019Updated 6 years ago
- ACT COVID Ontology☆15Sep 30, 2021Updated 4 years ago
- Technologically Assisted Reviews in Empirical Medicine☆24Apr 17, 2025Updated 11 months ago
- 嵌入式课程实验及作业☆13Jun 30, 2016Updated 9 years ago
- Ollie is a open information extractor that uses dependency parses.☆12Sep 27, 2013Updated 12 years ago
- Scripts developed by Leonard Wee for the Raystation v5 Treatment Planning System☆10Sep 8, 2016Updated 9 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Repository for managing python tools that model standoff annotations for i2b2 2014 challenge☆14May 12, 2015Updated 10 years ago
- using AI model to infer patient phenotypes from identified named entities (instances of biomedical concepts)☆10Jan 13, 2023Updated 3 years ago
- tools to analyze a collection of texts and identify relevant words☆12May 20, 2018Updated 7 years ago
- Find more info @ youtube.com/axiomaticuncertainty☆11Aug 20, 2018Updated 7 years ago
- The Leo framework - The VINCI-developed Natural Language Processing(NLP) infrastructure using UIMA.☆23Jun 4, 2023Updated 2 years ago
- Transformers for Clinical NLP☆27Mar 26, 2026Updated 2 weeks ago
- ☆10Jun 9, 2017Updated 8 years ago