babylonhealth / EHR-Rel
Biomedical concept relatedness benchmark sampled from electronic health records
☆10Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for EHR-Rel
- ☆27Updated 3 years ago
- Code for the paper "Knowledge Base Completion for Constructing Problem-Oriented Medical Records" at MLHC 2020☆11Updated 3 years ago
- Code for doing machine learning with various EHRs☆21Updated last year
- ☆36Updated 2 years ago
- Clinical XLNet: Modeling Sequential Clinical Notes and Predicting Prolonged Mechanical Ventilation☆46Updated 3 years ago
- A python package for removing duplicate text in clinical notes or other documents☆34Updated 4 years ago
- Weak supervision methods for extracting real world evidence from EHRs☆33Updated 4 years ago
- Source code for a comprehensive analysis of MTL over EHR timeseries data.☆34Updated last year
- Code for "Trajectory Inspection: A Method for Iterative Clinician-Driven Design of Reinforcement Learning Studies"☆16Updated 4 years ago
- Code to study the generalisability of benchmark models on non-stationary EHRs.☆14Updated 5 years ago
- A Multimodal Transformer: Fusing Clinical Notes With Structured EHR Data for Interpretable In-Hospital Mortality Prediction☆29Updated 2 years ago
- ☆38Updated 2 years ago
- Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…☆39Updated 10 months ago
- Learning clinical-decision rules with interpretable models.☆20Updated last year
- Python package for machine learning for healthcare using a OMOP common data model☆104Updated last year
- Prompting Large Language Models for Zero-Shot Clinical Prediction with Structured Longitudinal Electronic Health Record Data☆17Updated 10 months ago
- ☆12Updated last year
- ☆97Updated 3 years ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆86Updated 5 months ago
- Contains public materials for students enrolled in MITx: 6.871x, Machine Learning for Healthcare☆20Updated 3 years ago
- MIMIC preprocessing for the ICML paper "Dynamic Measurement Scheduling for Event Forecasting Using Deep RL"☆18Updated 5 years ago
- ☆32Updated 5 years ago
- The Medkit-Learn(ing) Environment: Medical Decision Modelling through Simulation (NeurIPS 2021) by Alex J. Chan, Ioana Bica, Alihan Huyuk…☆28Updated 2 years ago
- Medical Similarity Dataset creation from SNOMED☆27Updated 2 years ago
- ☆38Updated 2 years ago
- EMNLP'22 | PromptEHR: Conditional Electronic Healthcare Records Generation with Prompt Learning☆26Updated last year
- Early sepsis detection w/ multitask gaussian process neural network☆14Updated 5 years ago
- ☆56Updated last year
- Code for Contextual Autocomplete paper published in MLHC2020☆13Updated 3 years ago
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆50Updated 10 months ago