PieterFivez / bionlp2017
Extract annotated misspellings from MIMIC-III.
☆12Updated 4 years ago
Alternatives and similar repositories for bionlp2017:
Users that are interested in bionlp2017 are comparing it to the libraries listed below
- Embedding Complexity In the Data Representation Instead of In the Model (arXiv:1802.04233)☆24Updated 7 years ago
- Medical Similarity Dataset creation from SNOMED☆27Updated 2 years ago
- Code to study the generalisability of benchmark models on non-stationary EHRs.☆14Updated 5 years ago
- Learning from Discharge Summaries to extract mentioned diagnoses using Hierarchical Attention Model☆34Updated 7 years ago
- Clinical Text Summarization with Syntax-Based Negation and Semantic Concept Identification☆21Updated 5 years ago
- ☆14Updated 5 years ago
- ☆29Updated 3 years ago
- Multitask Learning with Pretrained Transformers☆40Updated 4 years ago
- ☆13Updated 5 years ago
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆50Updated 3 years ago
- AMIA submission examining note-derived vector representations☆10Updated 2 years ago
- Converter from UD-trees to BART representation☆36Updated last year
- Quantifying biases in BERT embeddings pretrained on MIMIC-III clinical notes☆24Updated 4 years ago
- An active annotation tool based on brat(https://github.com/nlplab/brat)☆19Updated 7 years ago
- A simple baseline for the MedNLI dataset☆21Updated 6 years ago
- Weak supervision methods for extracting real world evidence from EHRs☆33Updated 5 years ago
- A toolkit for generating paraphrase vector representations for words in context☆23Updated 9 years ago
- Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.☆22Updated 4 years ago
- Miscellaneous tools for clinical ML☆29Updated 7 years ago
- ☆19Updated 6 years ago
- ☆12Updated 8 years ago
- NER System Developed at CMU☆11Updated 7 years ago
- ☆19Updated 2 years ago
- Clinical XLNet: Modeling Sequential Clinical Notes and Predicting Prolonged Mechanical Ventilation☆49Updated 3 years ago
- ☆17Updated 4 years ago
- Fast IdEntification of State-of-The-Art models using adaptive bandit algorithms☆14Updated 2 years ago
- ☆38Updated 3 years ago
- A fine-tuned BERT using EHR notes.☆14Updated 5 years ago
- This repository contains the DFKI Product Corpus, a dataset of 174 documents annotated for product and company named entities, and the re…☆12Updated 7 months ago
- VisBERT: Demo web app for "How Does BERT Answer Questions?"☆11Updated last year