stat115 / Lab_2021Links
Repository for all the labs for Spring 2021
☆114Updated 4 years ago
Alternatives and similar repositories for Lab_2021
Users that are interested in Lab_2021 are comparing it to the libraries listed below
Sorting:
- Step-by-step analysis pipeline for RNA-seq data☆160Updated 2 years ago
- Repository for all labs for STAT115 for 2020☆53Updated 5 years ago
- A complete guide for analyzing bulk RNA-seq data. Go from raw FASTQ files to mapping reads using STAR and differential gene expression an…☆112Updated 5 years ago
- This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster☆174Updated 4 years ago
- Download sequencing data and metadata from GSA, SRA, ENA, and DDBJ databases.☆228Updated last month
- Single cell RNA sequencing analysis course☆229Updated last month
- ☆136Updated 6 years ago
- The rendered book can be found at https://liulab-dfci.github.io/bioinfo-combio/☆101Updated 3 years ago
- Analysis of single cell RNA-seq data course☆159Updated 3 years ago
- 🔬 Bioinformatics Notebook. Scripts for bioinformatics pipelines, with quick start guides for programs and video demonstrations.☆200Updated 5 years ago
- ☆334Updated this week
- ☆102Updated 2 months ago
- Batch effect adjustment based on negative binomial regression for RNA sequencing count data☆199Updated 5 years ago
- Introduction to bulk RNA-seq☆130Updated 7 months ago
- ☆121Updated 6 years ago
- A short tutorial on how to use RSEM☆139Updated 5 years ago
- ☆211Updated 4 months ago
- Single Cell Analysis Pipelines☆114Updated this week
- A Systematic and Dynamic Pipeline for Single-Cell RNA Sequencing Analysis☆112Updated 2 years ago
- Cell type specific enhancer-gene predictions using ABC model (Fulco, Nasser et al, Nature Genetics 2019)☆243Updated 6 months ago
- Analysis pipeline for ATAC-seq data☆83Updated 2 years ago
- A (continuously updated) collection of references to Hi-C data. Predominantly human/mouse Hi-C data, with replicates.☆201Updated this week
- This folder ultimately should contains all my project shown in my Youtube channel.☆40Updated 3 years ago
- ☆187Updated 8 years ago
- Discovering known and novel miRNAs from small RNA sequencing data☆157Updated 2 weeks ago
- tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies☆176Updated 2 weeks ago
- ☆145Updated 6 years ago
- my notes for scATACseq analysis☆132Updated last year
- Source code for R in Action, Second Edition☆28Updated 8 years ago
- circular RNA analysis toolset☆86Updated last year