stat115 / Homework_2020

Related projects ⓘ

Alternatives and complementary repositories for Homework_2020

• stat115 / Lab_2020
  Repository for all labs for STAT115 for 2020
  ☆48Updated 4 years ago
• stat115 / Lab_2021
  Repository for all the labs for Spring 2021
  ☆86Updated 3 years ago
• cellgeni / scRNA.seq.course
  Analysis of single cell RNA-seq data course
  ☆124Updated 2 years ago
• NBISweden / workshop-scRNAseq
  Single cell RNA sequencing analysis course
  ☆195Updated last month
• crazyhottommy / TCR-BCR-seq-analysis
  T/B cell receptor sequencing analysis notes
  ☆212Updated 3 months ago
• erilu / bulk-rnaseq-analysis
  A complete guide for analyzing bulk RNA-seq data. Go from raw FASTQ files to mapping reads using STAR and differential gene expression an…
  ☆66Updated 4 years ago
• Dragonmasterx87 / Interactive-3D-Plotting-in-Seurat-3.0.0
  This repository contains R code, with which you can create 3D UMAP and tSNE plots of Seurat analyzed scRNAseq data
  ☆117Updated last year
• sajuukLyu / Protocols-4pub
  Multi-omics analysis protocols by Lyu.
  ☆48Updated last year
• OpenGene / scrnapip
  A Systematic and Dynamic Pipeline for Single-Cell RNA Sequencing Analysis
  ☆103Updated last year
• brianpenghe / Bio-Jobs
  A list of positions (mostly biology-related) open to apply
  ☆32Updated 3 weeks ago
• singleron-RD / CeleScope
  Single Cell Analysis Pipelines
  ☆92Updated last month
• KrishnaswamyLab / SingleCellWorkshop
  ☆88Updated 3 years ago
• CebolaLab / RNA-seq
  Step-by-step analysis pipeline for RNA-seq data
  ☆77Updated last year
• Winnie09 / GPTCelltype
  ☆159Updated 6 months ago
• WWXkenmo / Bioinfor_researchers_atlas
  ☆44Updated 2 years ago
• jmzeng1314 / scRNA_10X
  ☆91Updated 5 years ago
• IOBR / IOBR
  IOBR is an R package to perform comprehensive analysis of tumor microenvironment and signatures for immuno-oncology.
  ☆204Updated last week
• crazyhottommy / scATACseq-analysis-notes
  my notes for scATACseq analysis
  ☆119Updated 6 months ago
• czbiohub-sf / scell_lung_adenocarcinoma
  This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset
  ☆144Updated 3 years ago
• Swarbricklab-code / BrCa_cell_atlas
  Data processing and analysis related code associated with the study "A single-cell and spatially resolved atlas of human breast cancers".
  ☆107Updated last month
• hbctraining / Intro-to-ChIPseq-flipped
  ☆80Updated 4 months ago
• broadinstitute / depmap_omics
  What you need to process the Quarterly DepMap-Omics releases from Terra
  ☆110Updated this week
• slowkow / awesome-vdj
  📚 Tools and databases for analyzing HLA and VDJ genes.
  ☆210Updated 6 months ago
• BaderLab / CellAnnotationTutorial
  Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods
  ☆88Updated last year
• digitalcytometry / ecotyper
  EcoTyper is a machine learning framework for large-scale identification of cell states and cellular ecosystems from gene expression data.
  ☆184Updated 7 months ago
• mdozmorov / Immuno_notes
  Immunology-related bioinformatics data and tools
  ☆69Updated 6 months ago
• dviraran / xCell
  Cell types enrichment analysis
  ☆184Updated 5 months ago
• rnnh / bioinfo-notebook
  🔬 Bioinformatics Notebook. Scripts for bioinformatics pipelines, with quick start guides for programs and video demonstrations.
  ☆154Updated 4 years ago
• quadbio / scRNAseq_analysis_vignette
  Tutorial for scRNA-seq data analysis beginners using R
  ☆155Updated 7 months ago
• sib-swiss / single-cell-training
  SIB course on single cell transcriptomics by mostly using the Seurat pipeline
  ☆78Updated 3 weeks ago