Alternatives and similar repositories for biotite

Users that are interested in biotite are comparing it to the libraries listed below

• steineggerlab / foldseek
  Foldseek enables fast and sensitive comparisons of large structure sets.
  ☆1,083Updated this week
• YoshitakaMo / localcolabfold
  ColabFold on your local PC
  ☆770Updated 4 months ago
• sokrypton / ColabDesign
  Making Protein Design accessible to all via Google Colab!
  ☆829Updated last week
• soedinglab / hh-suite
  Remote protein homology detection suite.
  ☆598Updated 2 months ago
• martinpacesa / BindCraft
  User friendly and accurate binder design pipeline
  ☆856Updated 2 months ago
• RosettaCommons / PyRosetta.notebooks
  Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design
  ☆623Updated last year
• soedinglab / MMseqs2
  MMseqs2: ultra fast and sensitive search and clustering suite
  ☆1,848Updated last week
• ccsb-scripps / AutoDock-Vina
  AutoDock Vina
  ☆828Updated 3 weeks ago
• baker-laboratory / RoseTTAFold-All-Atom
  ☆758Updated 5 months ago
• gcorso / DiffDock
  Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking
  ☆1,352Updated 5 months ago
• prody / ProDy
  A Python Package for Protein Dynamics Analysis
  ☆506Updated this week
• Pymol-Scripts / Pymol-script-repo
  Collected scripts for Pymol
  ☆496Updated 2 months ago
• kalininalab / alphafold_non_docker
  AlphaFold2 non-docker setup
  ☆367Updated last year
• lightdock / lightdock
  Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
  ☆360Updated last month
• haddocking / pdb-tools
  A dependency-free cross-platform swiss army knife for PDB files.
  ☆432Updated 3 weeks ago
• KosinskiLab / AlphaPulldown
  ☆295Updated last week
• openmm / pdbfixer
  PDBFixer fixes problems in PDB files
  ☆594Updated last month
• gnina / gnina
  A deep learning framework for molecular docking
  ☆784Updated 2 months ago
• uw-ipd / RoseTTAFold2NA
  RoseTTAFold2 protein/nucleic acid complex prediction
  ☆366Updated last year
• ccsb-scripps / AutoDock-GPU
  AutoDock for GPUs and other accelerators
  ☆524Updated last month
• volkamerlab / teachopencadd
  TeachOpenCADD: a teaching platform for computer-aided drug design (CADD) using open source packages and data
  ☆922Updated last week
• debbiemarkslab / EVcouplings
  Evolutionary couplings from protein and RNA sequence alignments
  ☆284Updated last week
• google-deepmind / alphamissense
  ☆592Updated last year
• dauparas / ProteinMPNN
  Code for the ProteinMPNN paper
  ☆1,497Updated last year
• LPDI-EPFL / masif
  MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.
  ☆693Updated last year
• Graylab / DL4Proteins-notebooks
  Colab Notebooks covering deep learning tools for biomolecular structure prediction and design
  ☆444Updated last month
• generatebio / chroma
  A generative model for programmable protein design
  ☆770Updated last year
• pablo-arantes / making-it-rain
  Cloud-based molecular simulations for everyone
  ☆452Updated 3 weeks ago
• sacdallago / bio_embeddings
  Get protein embeddings from protein sequences
  ☆502Updated 2 years ago
• ViennaRNA / ViennaRNA
  The ViennaRNA Package
  ☆369Updated 3 months ago