rockt / SETHLinks
SNP Extraction Tool for Human Variations
☆27Updated last year
Alternatives and similar repositories for SETH
Users that are interested in SETH are comparing it to the libraries listed below
Sorting:
- Python library for work with BioCreative files☆13Updated 7 years ago
- Retrieve and process PubTator annotations☆44Updated last year
- ☆41Updated 5 years ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 4 years ago
- A framework for keeping biomedical text mining result up-to-date☆42Updated 4 years ago
- Tool that converts between BioC XML files and BioC JSON files☆16Updated 8 years ago
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …☆102Updated 4 years ago
- Reach Biomedical Information Extraction☆97Updated 6 months ago
- Python library for working with BioC files☆13Updated 7 years ago
- ☆22Updated 2 years ago
- Data structures and code to read/write BioC XML and Json.☆33Updated last year
- DeepDive Biomedical Tools☆14Updated 8 years ago
- NLP framework in python for entity recognition and relationship extraction☆115Updated 2 years ago
- Table compiling the list of biomedically-related corpora available for named entity recognition (and some also suitable for association d…☆18Updated 7 years ago
- This repository contains the corpora and supplementary data, along with instructions for recreating the experiments, for our paper: "Towa…☆15Updated 5 years ago
- Tokenization, sentence segmentation, POS tagging and dependency parsing for biomedical texts (BMC Bioinformatics 2019)☆33Updated 6 years ago
- NLM .nxml to text format conversion☆24Updated 10 years ago
- Phenotype comparison tools using semantic similarity.☆65Updated last year
- Public release of the DeepPhe analytic software☆30Updated 2 years ago
- CoCoScore: context-aware co-occurrence scores for text mining applications☆19Updated 6 years ago
- migrates from swat-4-med-safety/SW-DDI-catalog/drug-drug-interactions☆36Updated 7 years ago
- Named Entity Recognition for biomedical entities☆47Updated 2 years ago
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)☆19Updated 2 years ago
- Abbreviation definition dection library trained on PubMed abstracts☆48Updated 4 years ago
- Web interface that allows users to perform computer-assisted text annotation☆16Updated 2 years ago
- PubMedPortable automatically builds a PostgreSQL relational database schema and a Xapian full text index on PubMed XML files as well as i…☆26Updated 6 years ago
- Open Targets Library ETL Pipeline | Apache Beam☆16Updated 4 years ago
- ☆12Updated 4 years ago
- a module to calculate the MeSH similarity☆26Updated 4 years ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 2 years ago