Alternatives and similar repositories for SETH:

Users that are interested in SETH are comparing it to the libraries listed below

• greenelab / pubtator
  Retrieve and process PubTator annotations
  ☆44Updated last year
• 2mh / PyBioC
  Python library for work with BioCreative files
  ☆13Updated 7 years ago
• ncbi / BioConceptVec
  ☆41Updated 5 years ago
• ncbi-nlp / BioC-JSON
  Tool that converts between BioC XML files and BioC JSON files
  ☆16Updated 8 years ago
• BaderLab / saber
  Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …
  ☆102Updated 4 years ago
• greenelab / snorkeling
  Extracting biomedical relationships from literature with Snorkel 🏊
  ☆58Updated 4 years ago
• jakelever / pubrunner
  A framework for keeping biomedical text mining result up-to-date
  ☆42Updated 4 years ago
• clulab / reach
  Reach Biomedical Information Extraction
  ☆97Updated 4 months ago
• HazyResearch / snorkel-biocorpus
  ☆15Updated 6 years ago
• bionlplab / bioc
  Data structures and code to read/write BioC XML and Json.
  ☆32Updated last year
• OntoGene / PyBioC
  Python library for working with BioC files
  ☆13Updated 7 years ago
• brianyiktaktsui / DEEP_NLP
  ☆12Updated 4 years ago
• ncbi-nlp / DeepRel
  A convolutional neural network model for relation extraction.
  ☆13Updated 2 years ago
• datquocnguyen / BioPosDep
  Tokenization, sentence segmentation, POS tagging and dependency parsing for biomedical texts (BMC Bioinformatics 2019)
  ☆33Updated 6 years ago
• ncbi-nlp / Ab3P
  Abbreviation definition dection library trained on PubMed abstracts
  ☆47Updated 4 years ago
• SmartDataAnalytics / BioKEEN
  A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…
  ☆45Updated 2 years ago
• larsjuhljensen / tagger
  ☆22Updated 2 years ago
• DeepPhe / DeepPhe-Release
  Public release of the DeepPhe analytic software
  ☆30Updated 2 years ago
• hu-ner / huner
  Named Entity Recognition for biomedical entities
  ☆47Updated 2 years ago
• KerstenDoering / PubMedPortable
  PubMedPortable automatically builds a PostgreSQL relational database schema and a Xapian full text index on PubMed XML files as well as i…
  ☆26Updated 6 years ago
• BaderLab / Towards-reliable-BioNER
  This repository contains the corpora and supplementary data, along with instructions for recreating the experiments, for our paper: "Towa…
  ☆15Updated 5 years ago
• dterg / biomedical_corpora
  Table compiling the list of biomedically-related corpora available for named entity recognition (and some also suitable for association d…
  ☆18Updated 7 years ago
• GateNLP / Bio-YODIE
  Bio-YODIE is GATE's biomedical named entity linking pipeline.
  ☆17Updated 5 years ago
• spyysalo / nxml2txt
  NLM .nxml to text format conversion
  ☆24Updated 9 years ago
• gyorilab / gilda
  Grounding of biomedical named entities with contextual disambiguation
  ☆43Updated 3 weeks ago
• GeneDx / phenopy
  Phenotype comparison tools using semantic similarity.
  ☆64Updated 11 months ago
• suamin / MIL-RBERT
  MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)
  ☆19Updated last year
• allenai / genia-dependency-trees
  Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.
  ☆22Updated 4 years ago
• UCDenver-ccp / CRAFT
  ☆72Updated last year
• OntoGene / OGER
  ☆24Updated 4 years ago