rockt / SETHLinks
SNP Extraction Tool for Human Variations
☆27Updated last year
Alternatives and similar repositories for SETH
Users that are interested in SETH are comparing it to the libraries listed below
Sorting:
- Retrieve and process PubTator annotations☆44Updated last year
- Python library for work with BioCreative files☆13Updated 7 years ago
- A framework for keeping biomedical text mining result up-to-date☆42Updated 4 years ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 4 years ago
- Tool that converts between BioC XML files and BioC JSON files☆16Updated 8 years ago
- ☆41Updated 5 years ago
- Data structures and code to read/write BioC XML and Json.☆32Updated last year
- Reach Biomedical Information Extraction☆98Updated 6 months ago
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …☆102Updated 4 years ago
- ☆22Updated 2 years ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 2 years ago
- ☆24Updated 4 years ago
- DeepDive Biomedical Tools☆14Updated 8 years ago
- Python library for working with BioC files☆13Updated 7 years ago
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Updated 10 months ago
- Phenotype comparison tools using semantic similarity.☆64Updated last year
- Table compiling the list of biomedically-related corpora available for named entity recognition (and some also suitable for association d…☆18Updated 7 years ago
- Public release of the DeepPhe analytic software☆30Updated 2 years ago
- a module to calculate the MeSH similarity☆26Updated 4 years ago
- A project to capture biological pathway data from academic papers☆29Updated 2 months ago
- A python implementation of the Ensemble Biclustering for Classification (EBC) algorithm. EBC is a co-clustering algorithm that allows you …☆20Updated 8 years ago
- ☆12Updated 4 years ago
- ☆73Updated last year
- Biomedical wordlists (of drugs, genes, etc) for several text mining projects☆18Updated 2 years ago
- Named Entity Recognition for biomedical entities☆47Updated 2 years ago
- Get a nicely-chunked local copy of the biomedical literature (to use for other projects)!☆14Updated 11 months ago
- Machine-curated database of genetic disease and genome-wide association studies☆56Updated 6 years ago
- Open Targets Library ETL Pipeline | Apache Beam☆16Updated 4 years ago
- Tokenization, sentence segmentation, POS tagging and dependency parsing for biomedical texts (BMC Bioinformatics 2019)☆33Updated 6 years ago
- This repository contains the corpora and supplementary data, along with instructions for recreating the experiments, for our paper: "Towa…☆15Updated 5 years ago