cambridgeltl / BioNLP-2016Links
☆122Updated 7 years ago
Alternatives and similar repositories for BioNLP-2016
Users that are interested in BioNLP-2016 are comparing it to the libraries listed below
Sorting:
- Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)☆135Updated 11 months ago
- ☆230Updated 7 years ago
- ☆48Updated last year
- Clinical Concept Extraction with Contextual Word Embedding☆40Updated 5 years ago
- Crowdsourced ground truth for medical relation extraction.☆69Updated 6 years ago
- BioBert Pytorch☆116Updated 2 years ago
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…☆36Updated 6 years ago
- Turku Event Extraction System☆146Updated 6 years ago
- Named Entity Recognition for biomedical entities☆47Updated 2 years ago
- This repository contains supplementary data, and links to the model and corpora used for the paper: Transfer learning for biomedical name…☆37Updated 6 years ago
- Tokenization, sentence segmentation, POS tagging and dependency parsing for biomedical texts (BMC Bioinformatics 2019)☆33Updated 6 years ago
- ☆90Updated 5 years ago
- Abbreviation definition dection library trained on PubMed abstracts☆48Updated 4 years ago
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …☆102Updated 4 years ago
- Conversion from brat-flavored standoff to CoNLL format☆52Updated 4 years ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated 2 years ago
- Full abstract relation extraction from biological texts with bi-affine relation attention networks☆130Updated 6 years ago
- Generate-and-Rank Framework with Semantic Type Regularization for Biomedical Concept Normalization☆25Updated 4 years ago
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks☆42Updated 5 years ago
- Relation Extraction with Semeval 2010 data, i2b2 2010 VA challenge classification data and DDI extraction data.☆19Updated 5 years ago
- [AKBC 19] Improving Relation Extraction by Pre-trained Language Representations☆107Updated 3 years ago
- Machine reading comprehension on clinical case reports☆148Updated 5 years ago
- Bidirectional LSTM-CRF for Clinical Concept Extraction using i2b2-2010 data☆88Updated 8 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆296Updated 3 years ago
- For icibm paper☆11Updated 8 years ago
- NCBI disease corpus - related resources☆29Updated 8 years ago
- ☆73Updated last year
- Code regarding to our paper "N-ary Relation Extraction using Graph State LSTM"☆94Updated 5 years ago
- Python wraper for MetaMap☆174Updated 4 years ago
- A CRF-biLSTM based Biomedical NER model in Bioinformatics 2018.☆24Updated 6 years ago