Webserver & command-line tool for search of APO (unbound) protein structures from HOLO (bound) forms and vice versa. http://apoholo.cz
☆19Jun 14, 2024Updated last year
Alternatives and similar repositories for AHoJ-project
Users that are interested in AHoJ-project are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The central entry point to the P2Rank project with links to the individual projects, including references to documentation, datasets, etc…☆13Feb 11, 2026Updated 2 months ago
- Web application for protein-ligand binding sites analysis and visualization☆20Dec 27, 2025Updated 3 months ago
- Template-based RNA secondary structure visualization☆29Nov 20, 2024Updated last year
- A method for ranking fragments by how much novel information they give about protein targets in fragment screens. When using the results …☆10Oct 11, 2022Updated 3 years ago
- This is a GitHub Repository containing the data and code used for a thorough comparison of 11 ligand binding site prediction tools☆18Nov 19, 2024Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Clustering of SES virtual probes for pocket generation and ranking via Isolation Forest☆14Mar 22, 2023Updated 3 years ago
- Exploratory PyMOL-MDAnalysis molecular visualization system.☆19Apr 14, 2022Updated 3 years ago
- A library for building equivariant neural networks and a zoo of implementations & examples.☆32Aug 9, 2022Updated 3 years ago
- 1D Feature Viewer☆57Mar 30, 2026Updated 2 weeks ago
- Aligned Diffusion Schroedinger Bridges (UAI 2023)☆14Sep 18, 2025Updated 6 months ago
- GPU-accelerated protein-ligand docking with automated pocket detection, exploring through multi-pocket conditioning. Official Implementa…☆71Nov 22, 2025Updated 4 months ago
- AutoCorrelation of Pharmacophore Features☆15Mar 6, 2023Updated 3 years ago
- Program to create tautomers and ionisation states relevant to physiological pH.☆10May 8, 2017Updated 8 years ago
- Javascript based component for highlighting text-mined annotations of different semantic types in a full text article identified by a PMC…☆11Nov 29, 2016Updated 9 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Data set of protein-ligand complexes with reliable experimental structures and affinities☆45Oct 2, 2025Updated 6 months ago
- Interactive Python notebooks for PDBe API training☆59Feb 11, 2026Updated 2 months ago
- P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.☆410Apr 3, 2026Updated last week
- Code for ApoDock☆21Apr 7, 2025Updated last year
- ☆17Feb 8, 2024Updated 2 years ago
- Lagrangian formulation of Doob's h-transform allowing for efficient rare event sampling☆57Mar 26, 2025Updated last year
- MOLeculAR structure annoTator☆33Oct 2, 2024Updated last year
- ☆80Nov 25, 2025Updated 4 months ago
- Explicit crosslinks in AlphaFold 3☆23Mar 17, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Web application for protein-ligand binding sites analysis and visualization☆16Jan 9, 2023Updated 3 years ago
- Mol* as anywidget☆52Oct 13, 2025Updated 6 months ago
- ☆12Apr 4, 2025Updated last year
- A benchmark for 3D biomolecular structure prediction models☆69May 11, 2025Updated 11 months ago
- Source code of MOLLEO☆55Jul 8, 2025Updated 9 months ago
- mmCIF-based extension dictionary for computed structure models☆24Feb 5, 2026Updated 2 months ago
- RINGER: Rapid Conformer Generation for Macrocycles with Sequence-Conditioned Internal Coordinate Diffusion☆22Aug 13, 2024Updated last year
- Protein surface topographical mapping tool☆30Aug 17, 2023Updated 2 years ago
- A Light-Weight And Interpretable Molecular Docking Model☆26Oct 23, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- LaTex template for ITMO style presentations☆10Jan 19, 2025Updated last year
- Meta learning addresses noisy and under-labeled data in machine learning-guided antibody engineering (https://doi.org/10.1016/j.cels.2023…☆23Aug 8, 2024Updated last year
- ☆93Feb 14, 2024Updated 2 years ago
- ☆17Jan 5, 2024Updated 2 years ago
- A library to perform targeted free energy perturbation with normalizing flows.☆11Sep 1, 2025Updated 7 months ago
- Build conformational representations of Intrinsically Disordered Proteins and Regions by a guided sampling of the protein torsion space☆31Dec 18, 2025Updated 3 months ago
- Datasets for P2Rank project. https://github.com/rdk/p2rank☆27Nov 8, 2024Updated last year