SiNGA (Simulation of Natural Systems using Graph Automata) is an open-source library containing tools especially for structural bioinformatics and systems biology.
β11Aug 26, 2025Updated 10 months ago
Alternatives and similar repositories for singa
Users that are interested in singa are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- π Fit3D - An application for template-based detection of small structural motifs in protein structures and macromolecular structure dataβ¦β11Oct 16, 2018Updated 7 years ago
- A Java library for handling text and BinaryCIF files.β14Jan 13, 2026Updated 6 months ago
- Real-time structure motif searching in protein 3D structures using an inverted index strategyβ16Jul 19, 2025Updated last year
- Incremental 3D Delaunay Tetrahedralizationβ14Jul 21, 2024Updated last year
- ProtoTorch is a PyTorch-based Python toolbox for bleeding-edge research in prototype-based machine learning algorithms.β19Apr 30, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean β’ AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Repository of basic machine learning algorithms explained in a simple way.β19Jun 21, 2022Updated 4 years ago
- A small tool to patch PE files' import address table with an external payload DLL.β19Mar 19, 2026Updated 4 months ago
- Learning structural motif representations for efficient protein structure searchβ20May 2, 2017Updated 9 years ago
- BinaryCIF is a data format for storing text based CIF files using a more efficient binary encoding.β32Oct 14, 2024Updated last year
- δΈεη»΄ζ€οΌθ―·δ½Ώη¨ https://github.com/GTNewHorizons/NotEnoughCharactersβ13Mar 24, 2020Updated 6 years ago
- Processing MathML with Javaβ15Aug 2, 2015Updated 10 years ago
- Library to visualize protein sequence features in Typescript using D3. This repository is based on calipho-sib/feature-viewer.β24Feb 4, 2023Updated 3 years ago
- Protocol for finding informative protein families and then using them to score metagenomic sets.β10Oct 11, 2021Updated 4 years ago
- Archive of Beaker Notebookβ12May 9, 2017Updated 9 years ago
- AI Agents on DigitalOcean Gradient AI Platform β’ AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Benchmarks for Primitive Collectionsβ13Apr 4, 2023Updated 3 years ago
- A toolkit for predicting the binding mode of small molecules interacting with proteins based on interfacial rigidification, as assessed bβ¦β10Nov 22, 2016Updated 9 years ago
- Tapestry CSRF Protectionβ11Sep 23, 2025Updated 9 months ago
- A Bio2BEL package for DrugBank (https://www.drugbank.ca)β10Dec 14, 2020Updated 5 years ago
- Predicting Protein β Ligand Interaction by using Deep Learning Modelsβ11Nov 13, 2018Updated 7 years ago
- R tools for reconstructing metabolisms.β16May 13, 2026Updated 2 months ago
- π¦ ιΎεΌεεΈ [LRU] Fast, header-only, cross-platform and STL-like linked_hash_map & linked_hash_set for C++. (beats 100% submissions @ leetcodβ¦β17Aug 10, 2022Updated 3 years ago
- β11Dec 27, 2021Updated 4 years ago
- Curso intensivo de Python dictado para personas interesadas en trabajar en las areas de Data Analytics y Data Scienceβ10Nov 12, 2017Updated 8 years ago
- Virtual machines for every use case on DigitalOcean β’ AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Visualize linear and non-linear connections between numerical/categorical features (2D histogram with bubbles)β20Jul 11, 2019Updated 7 years ago
- The Railcraft Mod for Minecraft, source and development.β16Jul 5, 2026Updated 2 weeks ago
- Contact-based protein structure predictionβ10Feb 12, 2019Updated 7 years ago
- Protein structure descriptors and alignment based on 3D Zernike moments.β41Apr 10, 2026Updated 3 months ago
- β18Jul 9, 2026Updated last week
- Improved ab initio protein structure reconstructionβ15Mar 7, 2018Updated 8 years ago
- Jupyter kernel for the LAPPS Services DSL.β25May 3, 2018Updated 8 years ago
- Community-maintained Boltz fork with bug fixes, broader compatibility, and CI.β59Jul 14, 2026Updated last week
- The java implementation of the MMTF API, decoder and encoder.β12Dec 19, 2025Updated 7 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Scripts and Ansible playbook to setup Arch Linux on ZFS.β57Apr 16, 2026Updated 3 months ago
- Enhanced TestNG integration with Xray Test Management for Jiraβ10Jan 27, 2026Updated 5 months ago
- Peptide Virtual Screening Pipelineβ14Jul 3, 2019Updated 7 years ago
- β13Jun 14, 2026Updated last month
- Apache Spark based framework for analysis A/B experimentsβ15Nov 3, 2024Updated last year
- A random data generator to produce realistic data files for multiple file types (e.g. csv, log, json)β14May 18, 2023Updated 3 years ago
- β56Jan 15, 2026Updated 6 months ago