ranganathanlab / pySCA
Python3 implementation of Statistical Coupling Analysis (SCA)
☆13Updated 4 years ago
Alternatives and similar repositories for pySCA:
Users that are interested in pySCA are comparing it to the libraries listed below
- Python package to manage protein structures and their annotations☆42Updated last year
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆53Updated this week
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆27Updated last year
- scripts and facilities for in-silico mutagenesis with FoldX☆56Updated 3 months ago
- ☆34Updated 5 months ago
- A fast and simple Molecular Dynamics tutorial using GROMACS and PACKMOL.☆34Updated last year
- Interactive Python notebooks for PDBe API training☆52Updated 2 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆82Updated last year
- This repository includes the slides and the practicals for the course of Structural Bioinformatics of the MBB/QB degrees at the Universit…☆60Updated 2 months ago
- Modelling of Large Protein Complexes☆37Updated last year
- Direct coupling analysis software for protein and RNA sequences☆50Updated last year
- Protein Structure Analysis☆54Updated 2 weeks ago
- Cloud-based molecular docking for everyone☆11Updated 9 months ago
- GTalign, HPC protein structure alignment, superposition and search (alpha release)☆42Updated 2 months ago
- PyDock Tutorial☆30Updated 6 years ago
- Parametric Building of de novo Functional Topologies☆44Updated 3 years ago
- Set of Python scripts designed to be a dependency-free cross-platform swiss army knife for PDB files.☆26Updated 2 years ago
- ☆49Updated this week
- Framework for the rapid modeling glycans and glycoproteins.☆29Updated last year
- ☆38Updated last year
- PyMOL extension to color AlphaFold structures by confidence (pLDDT).☆89Updated 8 months ago
- Physicochemical properties, indices and descriptors for amino-acid sequences.☆89Updated this week
- DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.☆23Updated 3 weeks ago
- Set of useful HADDOCK utility scripts☆51Updated 7 months ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆34Updated 4 years ago
- Analysis of alphafold and colabfold results☆25Updated 2 weeks ago
- ☆29Updated 3 years ago
- An open-source library for the analysis of protein interactions.☆29Updated 3 years ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆41Updated 2 years ago
- A domain parser for Alphafold models☆34Updated last year