lmassier / hWAT_singlecellLinks
meta-analysis of new and published human WAT single cell data
☆13Updated 2 months ago
Alternatives and similar repositories for hWAT_singlecell
Users that are interested in hWAT_singlecell are comparing it to the libraries listed below
Sorting:
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Updated 7 months ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆28Updated 6 months ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆31Updated 6 months ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆26Updated 3 years ago
- ☆49Updated 10 months ago
- Ordering gene-expression and functional events in single-cell experiments☆22Updated last year
- This repository contains the CellTag data analysis R package to support clone calling and lineage reconstruction.☆21Updated 2 years ago
- ☆13Updated 10 months ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆31Updated 9 months ago
- Inferring CNV data from single cell ATAC seq☆23Updated last year
- ☆32Updated 4 months ago
- ☆13Updated last year
- analysis script for GBM single cell RNA seq data☆18Updated 4 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 5 years ago
- MultiK is a data-driven tool that objectively assesses the optimal number(s) of clusters based on the concept of consensus clustering via…☆22Updated last year
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆30Updated 2 years ago
- ☆32Updated 5 years ago
- Single-Cell Inference of Class Switch Recombination☆19Updated 2 months ago
- R package of CSOmap(developing☆14Updated 3 years ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆25Updated 3 months ago
- Functions for single cell data analysis☆32Updated 4 years ago
- R package for SIGMA, a clusterability measure for scRNA-seq data☆12Updated 3 years ago
- ☆18Updated last year
- Single-cell Orientation Tracing☆21Updated 3 years ago
- ☆10Updated 2 years ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆30Updated 11 months ago
- Scripts needed to generate the figures for the Monocle 2 paper (Qiu et al, 2017)☆29Updated 4 years ago
- We describe a transcriptional reference map of human natural killer (NK) cells based on analysis of scRNA-seq data from both blood and ti…☆11Updated 7 months ago
- ☆13Updated last year
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 7 months ago