Coursera MOOC Algorithms for DNA Sequencing by Ben Langmead, PhD, Jacob Pritt
☆13Nov 13, 2015Updated 10 years ago
Alternatives and similar repositories for Algorithms-for-DNA-Sequencing
Users that are interested in Algorithms-for-DNA-Sequencing are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- 🧬 Algorithms for DNA Sequencing by Johns Hopkins University☆37Dec 7, 2023Updated 2 years ago
- Copies of notebooks used in the practical sessions for Algorithms for DNA Sequencing☆426Jan 21, 2023Updated 3 years ago
- A repository for my solutions to problems from - http://www.rosalind.info☆23May 1, 2021Updated 5 years ago
- Several DNA sequencing algorithms coded in Python: Boyer-Moore, Pigeon Hole, k-mer, Naive, Approximate Matching☆13Oct 19, 2015Updated 10 years ago
- Slides for Algorithms for DNA Sequencing Coursera class☆366Sep 15, 2015Updated 10 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Source of Coursera online projects☆21May 2, 2016Updated 10 years ago
- A de novo prediction tool of chromatin accessible regions for plant genomes☆10Aug 12, 2021Updated 5 years ago
- Compute strain abundance in a defined microbial community☆10Jul 27, 2023Updated 3 years ago
- Genomic data science specialization☆89Oct 7, 2015Updated 10 years ago
- DNA Archive Simulator (DNArSim) is a memory channel model that simulate the entire DNA Data Storage process: from synthesis to basecallin…☆10Dec 6, 2021Updated 4 years ago
- EvoDynamic seeks to evolve and develop suitable discrete dynamic models of self-organizing systems based on local interactions.☆20May 9, 2025Updated last year
- Probabilistic single-individual haplotyping☆10Mar 15, 2019Updated 7 years ago
- A GWAS course☆12Nov 4, 2021Updated 4 years ago
- bash script to search for centromeric repeat patterns in PacBio data, using several current tools (trf and R)☆13Dec 1, 2016Updated 9 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Python image tiling library for image processing, object detection, etc.☆12Jul 25, 2024Updated 2 years ago
- Small world networks in Cellular Automata☆19Mar 26, 2021Updated 5 years ago
- MP-EST estimates species trees from a set of gene trees by maximizing a pseudo-likelihood function☆13Oct 31, 2025Updated 9 months ago
- ☆10Sep 29, 2022Updated 3 years ago
- ☆12Nov 23, 2020Updated 5 years ago
- DNA-D2S: a systematic error simulation Model for DNA Data Storage channel☆12Feb 14, 2022Updated 4 years ago
- Annotation Pipeline for NLR genes☆16Dec 6, 2018Updated 7 years ago
- Study of TE evolution in a population of genomes☆10Dec 11, 2023Updated 2 years ago
- Designer scaffolded DNA DX-based wireframe lattices☆14Jul 28, 2018Updated 8 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Repository of Jupyter Notebooks on Colab, Binder and Huggingface for Bio, Chemistry and Physics☆13Jul 29, 2023Updated 3 years ago
- Probabilistic Graphical Models in Python3.☆24Jun 4, 2025Updated last year
- Source code and data for "Pan-cancer analysis of bi-allelic alterations in homologous recombination (HR) DNA repair genes" ; See manuscri…☆13May 26, 2017Updated 9 years ago
- It consists of all the code examples of big datascience course taken at algorithmica☆13Oct 7, 2018Updated 7 years ago
- An adaptable Snakemake workflow which uses GATKs best practice recommendations to perform germline mutation calling starting with BAM fil…☆11Sep 17, 2021Updated 4 years ago
- SPIDER-WEB generates coding algorithms with superior error tolerance and real-time information retrieval capacity☆11Jun 21, 2024Updated 2 years ago
- Raw data and analysis of scRNA Seq experiments for the paper Multimodal Mapping of the Immune Landscape in Human Pancreatic Cancer. This …☆15Nov 30, 2020Updated 5 years ago
- How some homework solutions should work on some small examples☆11Aug 25, 2015Updated 10 years ago
- Perl scripts for working with the GFF format☆16Aug 24, 2011Updated 14 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A tool for genotyping Variable Number Tandem Repeats (VNTR) from sequence data☆49Dec 6, 2024Updated last year
- Document binarization using deep learning☆10Dec 31, 2020Updated 5 years ago
- RNA-seq analysis scripts☆18Jan 8, 2026Updated 7 months ago
- Train a language model using subtitles from all the Harry Potter films.☆12Jan 31, 2017Updated 9 years ago
- A metagenomic strategy for harnessing the chemical repertoire of the human microbiome☆33Jun 13, 2026Updated 2 months ago
- Development repository for R package 'PLSDAbatch ' hosted on Bioconductor.☆16Jun 26, 2026Updated last month
- scRNA seq analysis using Seurat V3☆13Jun 23, 2021Updated 5 years ago