Alternatives and similar repositories for JNB-Zips

Users that are interested in JNB-Zips are comparing it to the libraries listed below

• zhxiaokang / RASflow
  RNA-Seq analysis workflow
  ☆105Updated 4 years ago
• davetang / learning_vcf_file
  Learning the Variant Call Format
  ☆144Updated 2 months ago
• hoelzer-lab / rnaflow
  A simple RNA-Seq differential gene expression pipeline using Nextflow
  ☆100Updated 2 months ago
• griffithlab / rnabio.org
  website for the rnaseq course
  ☆110Updated this week
• h3abionet / h3agwas
  GWAS Pipeline for H3Africa
  ☆113Updated 5 months ago
• nf-core / differentialabundance
  Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq
  ☆84Updated last week
• boulderrinnlab / MASTER_CLASS
  ☆10Updated 5 months ago
• HadrienG / tutorials
  Various bioinformatics tutorials
  ☆61Updated 2 years ago
• signalbash / how_are_we_stranded_here
  Check strandedness of RNA-Seq fastq files
  ☆127Updated 3 years ago
• rajewsky-lab / mirdeep2
  Discovering known and novel miRNAs from small RNA sequencing data
  ☆154Updated last year
• raynamharris / Shell_Intro_for_Bioinformatics_STG
  Intro to Shell for Bioinformatics - with STG examples
  ☆28Updated 9 years ago
• nf-core / smrnaseq
  A small-RNA sequencing analysis pipeline
  ☆95Updated 5 months ago
• snakemake-workflows / rna-seq-kallisto-sleuth
  A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.
  ☆68Updated this week
• htseq / htseq
  HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.
  ☆106Updated 5 months ago
• hamidghaedi / Enrichment-Analysis
  From RNA-seq raw reads to enriched pathways by DEGs
  ☆32Updated last year
• seqeralabs / nextflow-tutorial
  Nextflow training material for introductory tutorial
  ☆107Updated 3 years ago
• NBISweden / workshop-ngsintro
  Workshop • Intro to Bioinformatics using NGS data • 5 days
  ☆16Updated last week
• biocore / tcga
  Microbial analysis in TCGA data
  ☆92Updated last year
• crazyhottommy / compbio_resources_chatomics
  ☆27Updated 2 years ago
• amarinderthind / RNA-seq-tutorial-for-gene-differential-expression-analysis
  This RNAseq data analysis tutorial is created for educational purpose
  ☆32Updated last month
• kvittingseerup / IsoformSwitchAnalyzeR
  An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)
  ☆118Updated 3 weeks ago
• trinityrnaseq / RNASeq_Trinity_Tuxedo_Workshop
  materials for the RNA-Seq workshop on Trinity and Tuxedo, covering de novo and genome-guided transcript assembly and downstream analysis.
  ☆48Updated 9 years ago
• CandiceChuDVM / RNA-Seq
  New user
  ☆42Updated 5 years ago
• bcgsc / mirna
  microRNA profiling pipeline
  ☆79Updated 3 years ago
• sib-swiss / first-steps-with-python-training
  repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training
  ☆64Updated last month
• nloyfer / wgbs_tools
  tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies
  ☆172Updated 5 months ago
• ShiLab-Bioinformatics / subread
  The Subread software package is a tool kit for processing next-gen sequencing data. It includes Subread aligner, Subjunc exon-exon juncti…
  ☆51Updated 2 years ago
• liulab-dfci / bioinfo-combio
  The rendered book can be found at https://liulab-dfci.github.io/bioinfo-combio/
  ☆100Updated 3 years ago
• tderrien / FEELnc
  FEELnc : FlExible Extraction of LncRNA
  ☆90Updated 3 months ago
• hbctraining / Accessing_public_genomic_data
  Tutorials on accessing public reference and genomic data
  ☆30Updated 8 months ago