oesterei / JNB-Zips
Jupyter notebooks by Laura Harris
☆17Updated last year
Related projects ⓘ
Alternatives and complementary repositories for JNB-Zips
- RNA-Seq analysis workflow☆104Updated 3 years ago
- Various bioinformatics tutorials☆57Updated last year
- Variant Calling Pipeline Using GATK4 and Nextflow☆53Updated last year
- ☆47Updated 3 years ago
- ☆68Updated 3 years ago
- This repository gives an overview of my teaching activities. Links to slides and data sets are included. Feel free to re-use my content.☆46Updated 3 weeks ago
- materials for the RNA-Seq workshop on Trinity and Tuxedo, covering de novo and genome-guided transcript assembly and downstream analysis.☆45Updated 8 years ago
- Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing☆109Updated 6 months ago
- Intro to Shell for Bioinformatics - with STG examples☆28Updated 8 years ago
- Issue tracker for the Biostar Handbook☆57Updated 2 years ago
- NGS-1 Data analysis course☆36Updated 3 years ago
- Analysis of metagenomic shotgun sequences including assembly, speciation, ARG discovery and more☆26Updated last year
- repository of the 2-day course "First steps with R in Life Sciences" from SIB-training☆42Updated 9 months ago
- Accurate and rapid RiboRNA sequences Detector based on deep learning☆99Updated 10 months ago
- ☆44Updated 9 months ago
- Workshop • Intro to Bioinformatics using NGS data • 5 days☆13Updated this week
- A small-RNA sequencing analysis pipeline☆74Updated 3 weeks ago
- course about NGS data processing: genomics and transcriptomics☆33Updated 3 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆45Updated 10 months ago
- Snakemake workflow for metagenomic classification with Kraken2☆66Updated last year
- Learning the Variant Call Format☆137Updated 7 months ago
- GWAS Pipeline for H3Africa☆106Updated last month
- Repository of common bioinformatics scripts☆38Updated 3 years ago
- Genomic Interactive Visualization Engine☆145Updated last year
- fork of RSeQC python RNAseq metrics suit of tools☆46Updated 5 years ago
- Repo for student website☆24Updated 2 weeks ago
- Match up paired end fastq files quickly and efficiently.☆140Updated 5 months ago
- Microbiome Projects from the Department of Genetics and Department of Gastroenterology and Hepatology , University Medical Centre Groning…☆52Updated last month
- ☆33Updated 3 weeks ago
- My youtube programming scripts☆38Updated last month