oesterei / JNB-ZipsLinks
Jupyter notebooks by Laura Harris
☆17Updated 2 years ago
Alternatives and similar repositories for JNB-Zips
Users that are interested in JNB-Zips are comparing it to the libraries listed below
Sorting:
- Intro to Shell for Bioinformatics - with STG examples☆28Updated 9 years ago
- RNA-Seq analysis workflow☆104Updated 4 years ago
- Learning the Variant Call Format☆142Updated last year
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆116Updated 5 months ago
- ☆27Updated 2 years ago
- ☆10Updated last month
- website for the rnaseq course☆104Updated 2 weeks ago
- Check strandedness of RNA-Seq fastq files☆124Updated 2 years ago
- This RNAseq data analysis tutorial is created for educational purpose☆33Updated 3 weeks ago
- Tutorials on accessing public reference and genomic data☆30Updated 5 months ago
- The rendered book can be found at https://liulab-dfci.github.io/bioinfo-combio/☆98Updated 3 years ago
- Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq☆79Updated this week
- GWAS Pipeline for H3Africa☆110Updated 2 months ago
- repository of the 2-day course "First steps with R in Life Sciences" from SIB-training☆48Updated last week
- A small-RNA sequencing analysis pipeline☆87Updated last month
- ☆54Updated this week
- A package for quantifying transposable elements at a locus level for RNAseq datasets.☆28Updated 5 months ago
- Workshop • Intro to Bioinformatics using NGS data • 5 days☆15Updated last month
- From RNA-seq raw reads to enriched pathways by DEGs☆32Updated last year
- My youtube programming scripts☆54Updated 6 months ago
- New user☆42Updated 4 years ago
- Accurate and rapid RiboRNA sequences Detector based on deep learning☆112Updated last year
- Bioinformatics and genomics resources☆77Updated 5 months ago
- HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.☆103Updated last month
- ☆32Updated 2 months ago
- A simple RNA-Seq differential gene expression pipeline using Nextflow☆101Updated 2 weeks ago
- ☆50Updated 4 years ago
- Web application to explore the Sequence Read Archive.☆218Updated last week
- Discovering known and novel miRNAs from small RNA sequencing data☆152Updated 10 months ago
- This repository gives an overview of my teaching activities. Links to slides and data sets are included. Feel free to re-use my content.☆51Updated last week