Alternatives and similar repositories for SOFTX-D-16-00070

Users that are interested in SOFTX-D-16-00070 are comparing it to the libraries listed below

• salilab / pmi
  Python Modeling Interface
  ☆13Updated last week
• rasbt / siteinterlock
  A novel approach to pose selection in protein-ligand docking based on graph theory.
  ☆20Updated 8 years ago
• Becksteinlab / hop
  Solvent network analysis. Hop is a python package based on MDAnalysis to analyze solvation dynamics.
  ☆14Updated 7 years ago
• philipwfowler / simple-membrane-protein-analysis
  This is a short tutorial showing how to use both VMD and MDAnalysis to analyse a molecular dynamics simulation of a membrane protein.
  ☆28Updated 5 years ago
• hutchisonlab / molecular-entropies
  Data and analysis scripts for understanding molecular entropies, including conformer flexibility
  ☆12Updated 4 years ago
• lupoglaz / GromacsIPython
  Using Gomacs from IPython notebook
  ☆19Updated 11 years ago
• Colvars / examples
  Example files for Colvars module: https://github.com/Colvars/colvars
  ☆13Updated 3 years ago
• NRGlab / FlexAID
  Flexible Artificial Intelligence Docking
  ☆17Updated last month
• tuffery / Frog2
  2D/3D generation for small compounds
  ☆33Updated 5 years ago
• ssalentin / pymol-animations
  Tutorials and examples for nicer animations (movies) and images in PyMOL.
  ☆21Updated 10 years ago
• RUBi-ZA / MODE-TASK
  PCA and normal mode analysis of proteins
  ☆18Updated last year
• ldomic / lintools
  Python script that creates 2D protein-ligand interaction images
  ☆14Updated 7 years ago
• dkoes / Open-Source-Molecular-Modelling
  ☆16Updated 9 years ago
• dkoes / shapedb
  ☆16Updated 6 years ago
• gdocking / gdock
  Protein-Protein Docking using Genetic Algorithm
  ☆18Updated last year
• mmtsb / toolset
  MMTSB Tool Set
  ☆32Updated last month
• SENSAAS / sensaas
  Shape-based alignment of molecules using 3D point-based representation
  ☆22Updated last year
• jyosa / MaPhi
  MaPhi is a program written in python for Linux, which compute descriptors for a set of molecules for chemoinformatics studies.
  ☆14Updated 2 years ago
• lucianlschan / Conformer-Geometry
  ☆12Updated 6 years ago
• iwatobipen / vs_vina
  ☆13Updated 4 years ago
• vogt-m / ccbmlib
  Modeling Tanimoto distributions for RDKit
  ☆18Updated 5 years ago
• hiteshpatel379 / PyWATER
  ☆13Updated 7 years ago
• moldyn / Clustering
  Robust and stable clustering of molecular dynamics simulation trajectories.
  ☆18Updated 3 years ago
• n-yoshikawa / ob-fragment-generation
  ☆13Updated 6 years ago
• dmorse / simpatico
  Molecular dynamics and Monte Carlo simulation package for polymeric and molecular liquids
  ☆34Updated 3 years ago
• insilichem / garleek
  QM/MM interfacing in Python
  ☆10Updated 6 years ago
• iwatobipen / chemo_info
  ☆31Updated 5 months ago
• swansonk14 / chemprop-factor
  Matrix factorization and deep learning for molecular property prediction
  ☆13Updated 6 years ago
• XiaohuaZhangLLNL / VinaLC
  A parallel molecular docking program based on AutoDock Vina
  ☆19Updated last week
• shub-bioinfo / Gromacs-scripts
  Gromacs molecular dynamics simulation analysis scripts
  ☆10Updated 3 years ago