Alternatives and similar repositories for MCRIBS

Users that are interested in MCRIBS are comparing it to the libraries listed below

• NeuroanatomyAndConnectivity / surfdist
  For calculating exact geodesic distances on cortical surface meshes
  ☆53Updated 9 months ago
• braincharter / vasculature
  Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space
  ☆49Updated 2 years ago
• johncolby / along-tract-stats
  A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.
  ☆44Updated 12 years ago
• neurabenn / precon_all
  precon_all surface pipline
  ☆22Updated last week
• Washington-University / NHPPipelines
  Enhancements of HCP Pipelines for non-human primates
  ☆29Updated 2 years ago
• nipreps / nibabies
  fMRIPrep Lifespan - A robust, transparent workflow tailored for neonate and infant MRI
  ☆32Updated last week
• jordandekraker / Hippocampal_AutoTop
  ☆10Updated 4 years ago
• neurospin / pypreclin
  ☆13Updated 5 years ago
• aces / CIVET_Full_Project
  CIVET Installer
  ☆26Updated 3 years ago
• Entodi / MeshNet
  Code and model of article "End-to-end learning of brain tissue segmentation from imperfect labeling" https://arxiv.org/abs/1612.00940
  ☆16Updated 7 years ago
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆66Updated last year
• PerkLab / SlicerMatlabBridge
  MatlabBridge extension for 3D Slicer
  ☆19Updated last year
• Aswendt-Lab / AIDAmri
  Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain
  ☆30Updated 2 months ago
• ecr05 / MSM_HOCR
  Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries
  ☆38Updated 2 years ago
• stnava / ANTsTutorial
  Guide to tutorial materials for ANTs/R
  ☆46Updated 6 years ago
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆62Updated last week
• BIC-MNI / minc-toolkit-v2
  Version 2 of the minc-toolkit, uses tools based on ITK version 4.x
  ☆53Updated last week
• HumanBrainED / NHP-BrainExtraction
  ☆38Updated 3 years ago
• nipreps / eddymotion
  Open-source eddy-current and head-motion correction for dMRI.
  ☆17Updated 4 months ago
• DevelopmentalImagingMCRI / karawun
  Convert tractography studies from mrtrix into dicom for use in navigation software
  ☆15Updated 3 months ago
• ofgulban / segmentator
  3D MRI data exploration and segmentation tool.
  ☆75Updated last year
• grandjeanlab / MultiRat
  A Rat fMRI multi-center study
  ☆33Updated 2 years ago
• Deep-MI / BrainPrint-legacy
  Python scripts for shape analysis of neuroimaging data (wrapping around shapeDNA and FreeSurfer)
  ☆20Updated 4 years ago
• WTCN-computational-anatomy-group / mb
  Group-wise diffeomorphic registration and segmentation of medical images.
  ☆21Updated 2 years ago
• pGarciaS / PREEMACS
  PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface
  ☆16Updated last year
• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆72Updated 10 months ago
• openneuropet / PET2BIDS
  PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sh…
  ☆28Updated last week
• freesurfer / surfa
  Python utilities for medical image and surface-based analysis
  ☆29Updated last week
• yeatmanlab / AFQ
  Automated Fiber Quantification
  ☆77Updated last year
• layerfMRI / LAYNII
  Stand alone fMRI software suite for layer-fMRI analyses.
  ☆92Updated 2 weeks ago