Software platform for clinical neuroimaging studies
☆279May 11, 2026Updated last week
Alternatives and similar repositories for clinica
Users that are interested in clinica are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Framework for the reproducible processing of neuroimaging data with deep learning methods☆178Mar 17, 2026Updated 2 months ago
- Framework for the reproducible classification of Alzheimer's disease using machine learning☆43May 31, 2022Updated 3 years ago
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆164May 11, 2026Updated last week
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆74Feb 14, 2026Updated 3 months ago
- A suite of brain PET processing pipelines☆14Jan 6, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- BIDScoin converts your source-level neuroimaging data to BIDS☆156Apr 16, 2026Updated last month
- The QDECR package for vertex-wise analyses in R☆12May 26, 2023Updated 2 years ago
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆359Jan 28, 2026Updated 3 months ago
- Neuroimaging analysis and visualization suite☆830May 12, 2026Updated last week
- PyTorch implementation of FastSurferCNN☆602Updated this week
- BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…☆247May 5, 2026Updated 2 weeks ago
- Preprocessing of arterial spin labeling (ASL) data☆61May 1, 2026Updated 2 weeks ago
- Flexible DICOM conversion into structured directory layouts☆278Apr 28, 2026Updated 3 weeks ago
- Preprocessing of diffusion MRI☆181May 6, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sh…☆31May 12, 2026Updated last week
- BIDS app wrapping recon-all from FreeSurfer☆45Mar 16, 2026Updated 2 months ago
- Partial Volume Correction in PET☆68Dec 10, 2024Updated last year
- multi atlas transfer tools for neuroimaging (maTT)☆69Nov 18, 2024Updated last year
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆79Mar 18, 2026Updated 2 months ago
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆198Mar 6, 2026Updated 2 months ago
- dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC☆1,153May 12, 2026Updated last week
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆95May 13, 2026Updated last week
- micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read…☆120May 6, 2026Updated 2 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.☆76Dec 27, 2025Updated 4 months ago
- A framework for developing neural network models for 3D image processing.☆166Apr 14, 2026Updated last month
- A statistics and context decoding toolbox for neuroimaging.☆117May 4, 2026Updated 2 weeks ago
- Workflows and interfaces for neuroimaging packages☆825Mar 30, 2026Updated last month
- A dynamic connectome mapping module in python.☆112Jul 24, 2023Updated 2 years ago
- GE HealthCare MRI research☆20Jun 30, 2025Updated 10 months ago
- Python tools for querying and manipulating BIDS datasets.☆257May 11, 2026Updated last week
- Plotting tool for brain atlases, in ggplot☆260Apr 16, 2026Updated last month
- fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual interv…☆733Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Fragments FreeSurfer parcellation annotation in N-equal sized parcels☆29Aug 13, 2020Updated 5 years ago
- Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, resting/state functional MRI, and recently EEG processing p…☆83Mar 20, 2026Updated 2 months ago
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆111May 11, 2026Updated last week
- BrainPainter - Brain Visualisation Software☆72Feb 28, 2023Updated 3 years ago
- The TemplateFlow Archive - A DataLad super-dataset☆97Mar 17, 2026Updated 2 months ago
- Subtype and Stage Inference (SuStaIn) algorithm with an example using simulated data.☆207Mar 30, 2026Updated last month
- Contrast-agnostic segmentation of MRI scans☆554Jul 17, 2024Updated last year