DeepPrep: An accelerated, scalable, and robust pipeline for neuroimaging preprocessing empowered by deep learning
☆124Mar 12, 2026Updated 3 months ago
Alternatives and similar repositories for DeepPrep
Users that are interested in DeepPrep are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆16Dec 2, 2024Updated last year
- Schaefer Local-Global Parcellation Atlas for the ggsegverse ecosystem☆16Jun 22, 2026Updated last week
- Preprocessing of diffusion MRI☆185Jun 19, 2026Updated last week
- BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…☆251Jun 9, 2026Updated 2 weeks ago
- Sequence Adaptive Multimodal SEGmentation (SAMSEG)☆19Jun 9, 2026Updated 2 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- REACT: Receptor-Enriched Analysis of functional Connectivity by Targets☆26Aug 23, 2023Updated 2 years ago
- A toolbox for comparing brain maps☆328Jun 13, 2026Updated 2 weeks ago
- ciftiTools R package☆58Jun 23, 2026Updated last week
- A lightweight package to plot brain surfaces with Python.☆46Jul 25, 2023Updated 2 years ago
- Deprecated☆23Mar 20, 2026Updated 3 months ago
- PyTorch implementation of FastSurferCNN☆618Updated this week
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆165Jun 1, 2026Updated 3 weeks ago
- Processing tools for high-resolution neuroimaging☆73Dec 18, 2025Updated 6 months ago
- Custom MATLAB code to determine an optimal scalp placement of a TMS coil on the computational model of the subject's head. (1) Optimal co…☆10Jun 5, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Post-processing of fMRIPrep, NiBabies, and HCP outputs☆116Jun 11, 2026Updated 2 weeks ago
- Preprocessing of arterial spin labeling (ASL) data☆63Jun 8, 2026Updated 3 weeks ago
- ☆10Nov 9, 2020Updated 5 years ago
- This repository contains a Python implementation of Morphometric INverse Divergence (MIND) calculation for the estimation of structural s…☆54Apr 17, 2024Updated 2 years ago
- Public release of The Cole-Anticevic Brain-wide Network Partition (CAB-NP)☆89Updated this week
- Benchmark denoising strategies available from fmriprep.☆16Dec 18, 2025Updated 6 months ago
- A package for publication-ready brain surface figures☆75Nov 18, 2025Updated 7 months ago
- generate connectome from fMRIPrep outputs☆12Jun 13, 2026Updated 2 weeks ago
- fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual interv…☆738Jun 17, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Connectome Computation System☆82Sep 12, 2024Updated last year
- Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, resting/state functional MRI, and recently EEG processing p…☆84Mar 20, 2026Updated 3 months ago
- Code for computing cross-correlation (lags) and autocorrelation (intrinsic timescales) from multivariate time series. Optimized for fMRI …☆25Nov 7, 2024Updated last year
- The TemplateFlow Archive - A DataLad super-dataset☆98Mar 17, 2026Updated 3 months ago
- xGAP is an efficient, modular, extensible and fault-tolerant pipeline for massively parallelized genomic analysis/variant discovery from …☆11Oct 21, 2020Updated 5 years ago
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆203Jun 11, 2026Updated 2 weeks ago
- micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read…☆120Updated this week
- ☆747Mar 25, 2026Updated 3 months ago
- Code for implementing the Targeted Functional Network Stimulation (TANS) approach described in "Automated optimization of TMS coil placem…☆14Apr 6, 2026Updated 2 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data☆125Jun 22, 2026Updated last week
- ☆11Apr 6, 2026Updated 2 months ago
- ☆16Nov 5, 2025Updated 7 months ago
- The React Material UI interface for NiiVue☆13Nov 15, 2023Updated 2 years ago
- THOI: An efficient library for higher order interactions analysis based on Gaussian copulas enhanced by batch-processing☆24Jun 9, 2026Updated 2 weeks ago
- The Midnight Scanning Club Codebase☆41Jun 26, 2019Updated 7 years ago
- The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets☆131Nov 8, 2022Updated 3 years ago