DeepPrep: An accelerated, scalable, and robust pipeline for neuroimaging preprocessing empowered by deep learning
☆115Mar 12, 2026Updated 3 weeks ago
Alternatives and similar repositories for DeepPrep
Users that are interested in DeepPrep are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆16Dec 2, 2024Updated last year
- Schaefer Local-Global Parcellation Atlas for the ggsegverse ecosystem☆17Apr 2, 2026Updated last week
- Preprocessing of diffusion MRI☆178Mar 17, 2026Updated 3 weeks ago
- BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…☆245Feb 9, 2026Updated 2 months ago
- Sequence Adaptive Multimodal SEGmentation (SAMSEG)☆18Apr 1, 2026Updated last week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- REACT: Receptor-Enriched Analysis of functional Connectivity by Targets☆25Aug 23, 2023Updated 2 years ago
- A toolbox for comparing brain maps☆320Apr 23, 2025Updated 11 months ago
- ciftiTools R package☆58Mar 24, 2026Updated 2 weeks ago
- A lightweight package to plot brain surfaces with Python.☆45Jul 25, 2023Updated 2 years ago
- Deprecated☆24Mar 20, 2026Updated 2 weeks ago
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆162Mar 26, 2026Updated 2 weeks ago
- Processing tools for high-resolution neuroimaging☆73Dec 18, 2025Updated 3 months ago
- Custom MATLAB code to determine an optimal scalp placement of a TMS coil on the computational model of the subject's head. (1) Optimal co…☆10Jun 5, 2024Updated last year
- Post-processing of fMRIPrep, NiBabies, and HCP outputs☆109Apr 2, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Preprocessing of arterial spin labeling (ASL) data☆55Updated this week
- ☆10Nov 9, 2020Updated 5 years ago
- PyTorch implementation of FastSurferCNN☆592Mar 18, 2026Updated 3 weeks ago
- This repository contains a Python implementation of Morphometric INverse Divergence (MIND) calculation for the estimation of structural s…☆53Apr 17, 2024Updated last year
- Public release of The Cole-Anticevic Brain-wide Network Partition (CAB-NP)☆84Feb 8, 2021Updated 5 years ago
- Benchmark denoising strategies available from fmriprep.☆16Dec 18, 2025Updated 3 months ago
- A package for publication-ready brain surface figures☆70Nov 18, 2025Updated 4 months ago
- generate connectome from fMRIPrep outputs☆12Updated this week
- fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual interv…☆725Updated this week
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Connectome Computation System☆82Sep 12, 2024Updated last year
- Code for computing cross-correlation (lags) and autocorrelation (intrinsic timescales) from multivariate time series. Optimized for fMRI …☆25Nov 7, 2024Updated last year
- Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, resting/state functional MRI, and recently EEG processing p…☆83Mar 20, 2026Updated 2 weeks ago
- xGAP is an efficient, modular, extensible and fault-tolerant pipeline for massively parallelized genomic analysis/variant discovery from …☆11Oct 21, 2020Updated 5 years ago
- The TemplateFlow Archive - A DataLad super-dataset☆94Mar 17, 2026Updated 3 weeks ago
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆194Mar 6, 2026Updated last month
- micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read…☆117Mar 20, 2026Updated 2 weeks ago
- ☆729Mar 25, 2026Updated 2 weeks ago
- Code for implementing the Targeted Functional Network Stimulation (TANS) approach described in "Automated optimization of TMS coil placem…☆14Sep 15, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data☆119Updated this week
- ☆11Feb 23, 2026Updated last month
- The React Material UI interface for NiiVue☆12Nov 15, 2023Updated 2 years ago
- ☆15Nov 5, 2025Updated 5 months ago
- THOI: An efficient library for higher order interactions analysis based on Gaussian copulas enhanced by batch-processing☆22Aug 19, 2025Updated 7 months ago
- The Midnight Scanning Club Codebase☆41Jun 26, 2019Updated 6 years ago
- The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets☆132Nov 8, 2022Updated 3 years ago