pBFSLab / DeepPrepLinks
DeepPrep: An accelerated, scalable, and robust pipeline for neuroimaging preprocessing empowered by deep learning
☆98Updated 3 weeks ago
Alternatives and similar repositories for DeepPrep
Users that are interested in DeepPrep are comparing it to the libraries listed below
Sorting:
- Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variabl…☆108Updated last week
- Preprocessing of diffusion MRI☆162Updated last week
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆149Updated last week
- ☆39Updated 3 years ago
- Convolutional Neural Network trained for age prediction using a large (n=11,729) set of MRI scans from a highly diversified cohort spanni…☆54Updated 4 years ago
- Preprocessing of arterial spin labeling (ASL) data☆50Updated last week
- Harmonization of multi-site imaging data with ComBat (Python)☆146Updated 2 years ago
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆100Updated last week
- A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!☆96Updated 5 months ago
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆63Updated this week
- This repository contains a Python implementation of Morphometric INverse Divergence (MIND) calculation for the estimation of structural s…☆38Updated last year
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆77Updated 4 years ago
- PET Unified Pipeline☆23Updated 4 years ago
- ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data☆101Updated this week
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/☆44Updated this week
- Scripts to prepare MP2RAGE for Freesurfer☆28Updated last year
- Processing tools for high-resolution neuroimaging☆71Updated 9 months ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆70Updated last year
- ☆29Updated last year
- This repository will host scripts used to map structural and functional brain connectivity matrices for the UK biobank dataset.☆67Updated last year
- ☆12Updated 2 years ago
- micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read…☆108Updated this week
- Fast brain extraction using neural networks☆41Updated last year
- A suite of brain PET processing pipelines☆14Updated 7 months ago
- The TemplateFlow Archive - A DataLad super-dataset☆87Updated 2 weeks ago
- Single Shell Free Water Elimination Model for Diffusion Tensor Imaging☆30Updated last year
- Post-processing of fMRIPrep, NiBabies, and HCP outputs☆98Updated this week
- ☆193Updated 2 years ago
- Pipeline for Analysing Lesions after Stroke (PALS) is a scalable and user-friendly toolbox designed to facilitate standardised analysis a…☆24Updated 4 months ago
- Project your functional brain signal onto the white matter, and explore the pathways supporting brain functions.☆30Updated last year