pBFSLab / DeepPrepLinks
DeepPrep: An accelerated, scalable, and robust pipeline for neuroimaging preprocessing empowered by deep learning
☆94Updated last week
Alternatives and similar repositories for DeepPrep
Users that are interested in DeepPrep are comparing it to the libraries listed below
Sorting:
- Preprocessing of diffusion MRI☆160Updated this week
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆144Updated this week
- Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variabl…☆104Updated this week
- A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!☆92Updated 4 months ago
- Convolutional Neural Network trained for age prediction using a large (n=11,729) set of MRI scans from a highly diversified cohort spanni…☆54Updated 4 years ago
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆63Updated this week
- ☆29Updated last year
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆77Updated 4 years ago
- Preprocessing of arterial spin labeling (ASL) data☆50Updated last week
- Jupyter notebooks for analyzing diffusion MRI data in order to calculate DTI, DKI, NODDI, SS3T-CSD, and MSMT-CSD modelled parametric maps☆14Updated last year
- This repository contains a Python implementation of Morphometric INverse Divergence (MIND) calculation for the estimation of structural s…☆38Updated last year
- ☆39Updated 3 years ago
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆73Updated last week
- ☆28Updated last year
- Pipeline for Analysing Lesions after Stroke (PALS) is a scalable and user-friendly toolbox designed to facilitate standardised analysis a…☆24Updated 4 months ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆52Updated last year
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆99Updated this week
- Harmonization of multi-site imaging data with ComBat (Python)☆145Updated 2 years ago
- ☆191Updated 2 years ago
- ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data☆98Updated last week
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆69Updated last year
- White matter tractography clustering and more...☆77Updated last month
- structural analysis of neonatal brain MRI scans☆55Updated 4 years ago
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆73Updated this week
- ☆11Updated 2 years ago
- Post-processing of fMRIPrep, NiBabies, and HCP outputs☆97Updated this week
- DICOM to NIfTI conversion, NIfTI tools☆100Updated 11 months ago
- micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read…☆106Updated 2 months ago
- Fast brain extraction using neural networks☆39Updated last year
- Processing tools for high-resolution neuroimaging☆71Updated 8 months ago