nf-core pipeline for comparative analysis of ortholog predictions
☆12Oct 7, 2026Updated last week
Alternatives and similar repositories for reportho
Users that are interested in reportho are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A pipeline to run and systematically evaluate Multiple Sequence Alignment (MSA) methods.☆41Updated this week
- Protein 3D structure prediction pipeline☆116Updated this week
- A Nextflow pipeline to play Doom☆10Dec 1, 2025Updated 10 months ago
- R package for single-cell comparative regulatory analysis☆13Jun 26, 2021Updated 5 years ago
- Nextflow pipeline for the computation of structure-based MSAs with AlphaFold2 models☆13Dec 20, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- NCBI download and Orthofinder analysis☆13Jun 17, 2022Updated 4 years ago
- A nextflow pipeline which integrates multiple omic data streams and performs coordinated analysis☆11Oct 7, 2026Updated last week
- Pipeline for RNA and DNA integrated analysis for somatic mutation detection☆13Updated this week
- Python package for processing deep learning models☆16Dec 12, 2025Updated 10 months ago
- repository of scripts for comparative transcriptome analysis☆20Apr 10, 2019Updated 7 years ago
- A Method for Mapping Single-cell and Spatial Transcriptomics Data with Transfer Learning☆13Nov 17, 2023Updated 2 years ago
- fast, multithreaded sourmash operations: search, compare, and gather.☆25Oct 5, 2026Updated last week
- R package to perform sensitivity analysis for comparative methods☆14Jun 10, 2020Updated 6 years ago
- Inferring natural selection by comparative population genomic analysis across species☆28Oct 31, 2023Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- This is a phylogeny workflow for batch submission to HPC cluster built with Slurm queue manager☆12Mar 19, 2024Updated 2 years ago
- COSAP: Comparative Sequencing Analysis Platform☆20Aug 10, 2026Updated 2 months ago
- A python tool to do comparative analysis of mulitple single cell datasets.☆21Oct 25, 2019Updated 6 years ago
- Mabs, a genome assembly tool that optimizes parameters of Hifiasm and Flye☆38Apr 20, 2026Updated 5 months ago
- ☆10Sep 4, 2024Updated 2 years ago
- This is code for running Orthofinder -> PAML☆13Jul 27, 2016Updated 10 years ago
- A Mendelian approach to variant effect prediction built in keras☆22Aug 22, 2026Updated last month
- A CNN based model to predict the efficacy of Cas12a sgRNAs in diagnostic scenarios.☆12Feb 29, 2024Updated 2 years ago
- An R package for extracting mutational signatures from vcf files☆11Feb 13, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Repo for downloading and storing OMIM data☆20Oct 6, 2016Updated 10 years ago
- This is the official site for JASPER (Jellyfish based Assembly Sequence Polisher for Error Reduction)☆12Jun 27, 2024Updated 2 years ago
- ☆15Sep 18, 2026Updated last month
- A lightweight kmer-based algorithm for designing diagnostic CRISPR assays using genome data.☆13Aug 19, 2024Updated 2 years ago
- Toolset for training quantitative sequence to function models.☆23Mar 15, 2024Updated 2 years ago
- A single cell transcriptomics pipeline for QC, integration and making the data presentable☆117Updated this week
- Build phylogenomic datasets in seconds☆15Sep 23, 2026Updated 3 weeks ago
- UNDER CONSTRUCTION: A pipeline for Genome Wide Association Studies☆28Updated this week
- A data analysis package for high-dimensional, multi-block data.☆13Jan 13, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆23Jun 25, 2026Updated 3 months ago
- NCBI taxonomy tree in-memory mapping☆17Oct 20, 2022Updated 3 years ago
- Stochastic Testing and Input Manipulation for Unbiased Learning Systems☆32Oct 7, 2026Updated last week
- Population Genomics in R workshop☆13Mar 24, 2024Updated 2 years ago
- FASSO: Functional Annotations using Sequence and Structure Orthology☆10Jan 17, 2023Updated 3 years ago
- Map query sequences to the assemblies of all pre-June 2023 bacteria (https://ftp.ebi.ac.uk/pub/databases/AllTheBacteria/Releases/0.2/) on…☆12May 22, 2024Updated 2 years ago
- ☆20Nov 17, 2025Updated 11 months ago