PerkLab / SlicerFreeSurferLinks
This repository contains the SlicerFreeSurferImporter extension for 3D Slicer. The extension implements a module for importing models, scalar overlays, and segmentations from FreeSurfer, as well as handling the transformation of models from FreeSurfer to Slicer coordinates.
☆18Updated last month
Alternatives and similar repositories for SlicerFreeSurfer
Users that are interested in SlicerFreeSurfer are comparing it to the libraries listed below
Sorting:
- Tools to automate simple manipulations and measurements of medical images and segmentations in nifti format.☆22Updated 7 months ago
- Utilities for reading and writing files created by 3D Slicer☆41Updated 11 months ago
- Diffusion MRI analysis and visualization in 3D Slicer open source medical imaging platform.☆85Updated 3 weeks ago
- A single NIfTI image saved with all 48 spatial rotation permutations☆30Updated 4 years ago
- Version 2 of the minc-toolkit, uses tools based on ITK version 4.x☆53Updated 7 months ago
- MITK Diffusion - Official part of the Medical Imaging Interaction Toolkit☆102Updated 3 months ago
- 3D Slicer module for TorchIO.☆24Updated last year
- A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing vasculature (or blood vessels…☆50Updated 2 years ago
- dMRI based fiber tracking using parallel transport tractography☆28Updated 3 weeks ago
- Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space☆50Updated 3 years ago
- An open-source, free comprehensive software that will allow biomedical scientists to precisely locate shape changes in their imaging stud…☆67Updated 3 weeks ago
- standalone Brain Extraction Tool (bet2), released by☆20Updated 10 years ago
- Basic minc-tools from former minc repository☆33Updated last year
- The Medical Image Segmentation Tool Set (iSEG) is a fully integrated segmentation (including pre- and postprocessing) toolbox for the eff…☆53Updated 2 years ago
- A Medical Imaging Quality Assurance tool☆36Updated last year
- DCE MRI analysis in Julia☆38Updated 4 years ago
- Very fast greedy diffeomorphic registration code☆83Updated 2 weeks ago
- Slicer extensions index☆81Updated this week
- Open-source part of the medInria software☆98Updated last month
- Extension to import microCT data and conduct 3D morphometrics in Slicer☆114Updated 3 weeks ago
- DICOM to Nifti conversion with meta data preservation☆77Updated last year
- MatlabBridge extension for 3D Slicer☆19Updated last year
- This is a tool to quickly preview nifti images on the terminal☆68Updated 11 months ago
- NeuroSegmentation extension for 3D Slicer☆18Updated last year
- An image analysis workflow for open and reproducible research on femoral knee cartilage☆33Updated last year
- Processing and visualization tools for quantitative MRI data☆72Updated 2 weeks ago
- Using ANTs to process multiple MR image types for a single subject☆26Updated 8 years ago
- PCA Model for Brain Extraction☆17Updated 7 years ago
- Check metadata and visualize neuroimages within VSCode.☆45Updated 2 years ago
- Comprehensive software for neuronavigated brain stimulation☆10Updated last week