ankilab / DeepD3Links
☆22Updated 5 months ago
Alternatives and similar repositories for DeepD3
Users that are interested in DeepD3 are comparing it to the libraries listed below
Sorting:
- How to use Aligning Big Brains and Atlases with Python☆15Updated 2 years ago
- GPU-based 3D non-rigid volumetric registration☆41Updated this week
- A napari plugin for direct 3D cell segmentation -- taking you through training, inference, and review of masks☆103Updated last month
- Brainways☆21Updated this week
- Tools for distributed alignment of massive images☆86Updated this week
- A self-supervised denoising algorithm.☆27Updated last year
- 3D shape analysis using deep learning☆26Updated last year
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- The ImageJ framework for quantification of neuronal anatomy☆50Updated last week
- CloudReg☆11Updated last year
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆52Updated last week
- Process images using SimpleITK in napari☆21Updated 3 months ago
- Robust and unbiased estimation of the background distribution for fluorescence microscopy.☆12Updated last year
- ☆45Updated 5 years ago
- Intensify3D is an image normalization tool for large scale fluorescent imaging. It corrects heterogeneities in the signal (defined by the…☆19Updated 4 years ago
- Running compute-intense parts of BigStitcher distributed☆26Updated this week
- ☆46Updated 2 weeks ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 9 months ago
- ☆37Updated last week
- python tools for BigDataViewer☆22Updated 8 months ago
- A plugin that enables image segmentation provided by Allen Institute for Cell Science☆17Updated last year
- A napari plugin to analysis point spread functions.☆13Updated 5 months ago
- MultiModal Big Image Data Sharing and Exploration☆17Updated 2 years ago
- Acquire: a multi-camera video streaming software focusing on microscopy☆21Updated 10 months ago
- ☆18Updated 3 years ago
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- An ImageJ script to align and stitch three-dimensional tiles and quickly explore terabyte-sized microscopy datasets☆13Updated 3 years ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 4 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆28Updated 3 months ago
- Efficient cell detection in large images using cellfinder in napari☆22Updated last year