ankilab / DeepD3Links
☆22Updated 4 months ago
Alternatives and similar repositories for DeepD3
Users that are interested in DeepD3 are comparing it to the libraries listed below
Sorting:
- Brainways☆18Updated last month
- How to use Aligning Big Brains and Atlases with Python☆15Updated 2 years ago
- Tools for distributed alignment of massive images☆84Updated 3 weeks ago
- ☆18Updated 3 years ago
- Running compute-intense parts of BigStitcher distributed☆26Updated last week
- GPU-based 3D non-rigid volumetric registration☆37Updated last month
- A plugin that enables image segmentation provided by Allen Institute for Cell Science☆16Updated last year
- The ImageJ framework for quantification of neuronal anatomy☆50Updated last week
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 3 years ago
- A napari plugin for direct 3D cell segmentation -- taking you through training, inference, and review of masks☆96Updated last week
- A self-supervised denoising algorithm.☆26Updated last year
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 3 months ago
- Intensify3D is an image normalization tool for large scale fluorescent imaging. It corrects heterogeneities in the signal (defined by the…☆19Updated 4 years ago
- Process images using SimpleITK in napari☆21Updated 2 months ago
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆49Updated 2 weeks ago
- A napari plugin to analysis point spread functions.☆13Updated 3 months ago
- Geometry Processing of Conventionally Produced Mouse Brain Slice Images☆7Updated 5 years ago
- Registration to BrainGlobe atlases in napari using Elastix☆22Updated this week
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated 4 years ago
- ☆45Updated 5 years ago
- Loading and saving of image data.☆10Updated last year
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- Accurate denoising of voltage imaging data through statistically unbiased prediction, Nature Methods.☆83Updated 2 weeks ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 2 months ago
- Visualise brainreg registration output☆10Updated 3 years ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 4 years ago
- Acquire: a multi-camera video streaming software focusing on microscopy☆21Updated 8 months ago
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆36Updated last year
- CloudReg☆11Updated last year