Method container for computational neuroscience on brains.
☆31Oct 12, 2025Updated last year
Alternatives and similar repositories for brainlit
Users that are interested in brainlit are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- CloudReg☆11Apr 5, 2024Updated 2 years ago
- ☆27Jun 22, 2023Updated 3 years ago
- h-Shap provides an exact, fast, hierarchical implementation of Shapley coefficients for image explanations☆16Nov 20, 2023Updated 2 years ago
- ilastik plugin for napari☆15Mar 2, 2026Updated 7 months ago
- Scikit-learn compatible decision trees beyond those offered in scikit-learn☆88Updated this week
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- BlueBrain's recipe writer to parameterize structure and logic of a mouse whole-neocortex connectome☆10May 13, 2022Updated 4 years ago
- Conditional probability, conditional entropy, and mutual information estimation in Python. https://arxiv.org/abs/1907.00325☆12Oct 15, 2020Updated 6 years ago
- ☆14Jan 25, 2024Updated 2 years ago
- NeuroData's package for exploring and using progressive learning algorithms☆39Mar 21, 2025Updated last year
- ☆12Oct 9, 2022Updated 4 years ago
- A lightweight graph class library relevant for causal inference.☆13Mar 8, 2023Updated 3 years ago
- Code for recreating the figures in the brainrender paper (Claudi et al. 2020)☆13Dec 11, 2020Updated 5 years ago
- Nextflow pipeline encapsulating workflows for analyzing expansion lattice light-sheet microscopy (ExLLSM) imagery☆13Apr 15, 2026Updated 6 months ago
- Implementation of "Precise Mapping of Single Neurons by Calibrated 3D Reconstruction of Brain Slices Reveals Topographic Projection in Mo…☆16Oct 26, 2022Updated 4 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- A short course on network data science at Johns Hopkins University☆22Nov 3, 2023Updated 2 years ago
- Python Connectome Toolbox☆11Dec 15, 2010Updated 15 years ago
- Connectome File Format Library for Multi-Modal Neuroimaging Data and Metadata☆13Jan 14, 2019Updated 7 years ago
- NeuroData's MRI to Graphs (m2g) - connectome estimation package and pipeline☆65Mar 1, 2026Updated 7 months ago
- Serial-section automated anatomy extension for ScanImage☆19Oct 18, 2026Updated last week
- Pipeline and tools for estimating human connectomes from Diffusion, Structural, and Functional MRI☆30Feb 16, 2017Updated 9 years ago
- Process and analyze surfaces using vedo in napari.☆26May 13, 2024Updated 2 years ago
- Stitching of large tiled datasets☆23Oct 22, 2026Updated last week
- Brainways☆25Aug 28, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆12Nov 1, 2023Updated 2 years ago
- Shape processing in Python.☆38Updated this week
- Home of the miCube GithubPages documents.☆12Oct 3, 2026Updated 3 weeks ago
- Python implementation of fast-oopsi, smc-oopsi, wiener, and discretize with binning☆15May 17, 2022Updated 4 years ago
- [ICLR 2026] Official implementation of the paper: Learning a distance measure from the information-estimation geometry of data☆16Apr 29, 2026Updated 6 months ago
- Neuroimaging community skills repo - making LLMs leverage neuroimaging tools more effectively☆16Oct 15, 2026Updated 2 weeks ago
- This is the implementation of Sparse Projection Oblique Randomer Forest☆104May 3, 2024Updated 2 years ago
- Registration to BrainGlobe atlases in napari using Elastix☆34Oct 13, 2026Updated 2 weeks ago
- Work to track the comparison of COVID Tracking Project data to the CDC COVID tracker data.☆11Jun 15, 2020Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Code for "Boosted Generative Models", AAAI 2018.☆20Dec 26, 2017Updated 8 years ago
- Segmentation of anatomical structures in a common coordinate space☆38Oct 13, 2026Updated 2 weeks ago
- [MICCAI 2024] Weakly Supervised Learning of Cortical Surface Reconstruction from Segmentations☆12Oct 17, 2024Updated 2 years ago
- Computational Neurosciences repository☆32Feb 9, 2015Updated 11 years ago
- Python package for multi-view machine learning☆224Oct 29, 2023Updated 3 years ago
- Agentic Schema for Transparent Research Analysis.☆26Updated this week
- Python script that compares two HDF5 files.☆12Feb 27, 2019Updated 7 years ago