neurodata / ardentLinks
Affine and Regularized DEformative Numeric Transform (ardent) is a Python package for performing image registration using LDDMM.
☆18Updated 5 years ago
Alternatives and similar repositories for ardent
Users that are interested in ardent are comparing it to the libraries listed below
Sorting:
- czi reader from https://www.lfd.uci.edu/~gohlke/code/czifile.py.html☆15Updated last month
- Image mapping using the LDDMM algorithm, implemented in tensorflow☆17Updated 4 years ago
- A library to facilitate machine learning on multi-dimensional images.☆86Updated last week
- Neuroimaging widgets for jupyter notebooks☆87Updated 3 years ago
- C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.☆56Updated 5 months ago
- Block-wise task scheduling for large nD volumes.☆32Updated 8 months ago
- Read and write Neuroglancer datasets programmatically.☆167Updated 2 weeks ago
- A Python package for feature extraction of neural morphologies☆43Updated last month
- Connecting Java/ImgLib2 + Python/NumPy☆30Updated 4 months ago
- DICOM to Nifti conversion with meta data preservation☆77Updated last year
- a free, open-source web app for annotating, training, and evaluating image understanding algorithms☆25Updated 4 years ago
- Segmentation of anatomical structures in a common coordinate space☆34Updated last week
- Online documentation and reference for CLIJ☆28Updated 4 years ago
- Developing a Brain Atlas through Deep Learning☆53Updated 4 months ago
- A system for building mouse brain atlas from histology series☆11Updated 5 years ago
- Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆59Updated 5 years ago
- Get Your Brain Together Neuroimage Registration Workshops and Hackathons☆21Updated last year
- A framework for developing neural network models for 3D image processing.☆167Updated this week
- NeuroData's package for exploring and using progressive learning algorithms☆38Updated 8 months ago
- 2D image registration in python, using napari.☆16Updated 4 years ago
- Software package for neuron reconstruction and visualization☆40Updated 6 months ago
- Homepage for NeuroData☆12Updated last week
- A versatile image analysis software for biological image-based quantification using machine learning, especially for whole slide imaging.☆59Updated 4 years ago
- The ANTsX Ecosystem for Mapping the Mouse Brain☆16Updated last week
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆62Updated last week
- Axon/Myelin segmentation using Deep Learning☆123Updated last month
- Compose chunk operators to create a pipeline for local or distributed petabyte-scale computation☆54Updated 5 months ago
- ☆12Updated 4 years ago
- CloudReg☆11Updated last year
- website for the napari image viewer☆47Updated this week