brainglobe / brainrender-napariLinks
A napari plugin to render BrainGlobe atlases and associated data as layers.
☆22Updated this week
Alternatives and similar repositories for brainrender-napari
Users that are interested in brainrender-napari are comparing it to the libraries listed below
Sorting:
- Registration to BrainGlobe atlases in napari using Elastix☆22Updated this week
- Build unbiased anatomical templates from individual images☆11Updated this week
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Updated last year
- Anatomical space conventions made easy.☆10Updated last month
- Read and write files from the BrainGlobe neuroanatomy suite☆14Updated this week
- Loading and saving of image data.☆10Updated last year
- Re-usable GitHub Action scripts☆10Updated last month
- ☆10Updated 2 years ago
- Brainways☆18Updated 2 weeks ago
- How to use Aligning Big Brains and Atlases with Python☆15Updated 2 years ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆41Updated this week
- Mix-and-match computer vision tools for your animal behaviour analysis☆17Updated this week
- Visualise brainreg registration output☆10Updated 3 years ago
- NIU website on common software problems and their troubleshooting☆10Updated 2 weeks ago
- Segmentation of anatomical structures in a common coordinate space☆33Updated this week
- ☆10Updated last year
- ☆18Updated 3 years ago
- A repository for our participation in Google Summer of Code☆11Updated last month
- Pose estimation scripts to be run on the SWC HPC cluster☆12Updated last year
- ImageJ Plugin for Flexible Atlas Segmentation Tool for Multi-Area Processing☆21Updated 2 years ago
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆19Updated 3 weeks ago
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 4 years ago
- Tools for machine learning of animal behavior☆14Updated last year
- Standalone cellfinder cell detection algorithm☆19Updated last year
- Fast, volumetric cell detection. In development.☆17Updated this week
- Fancier logging with python.☆12Updated last month
- Efficient cell detection in large images using cellfinder in napari☆23Updated last year
- Utility to create a basic Python project structure with tests, CI etc.☆28Updated this week
- analysis tools for large-scale neural recordings☆14Updated 2 months ago
- GPU-based 3D non-rigid volumetric registration☆32Updated this week